OpenSRH: optimizing brain tumor surgery using intraoperative stimulated Raman histology. - Cheng Jiang 003; Asadur Chowdury; Xinhai Hou; Akhil Kondepudi; Christian W. Freudiger; Kyle Conway; Sandra Camelo-Piragua; Daniel A. Orringer; Honglak Lee; Todd C. Hollon (NeurIPS, 2022)

Hierarchical Discriminative Learning Improves Visual Representations of Biomedical Microscopy. - Cheng Jiang 003; Xinhai Hou; Akhil Kondepudi; Asadur Chowdury; Christian W. Freudiger; Daniel A. Orringer; Honglak Lee; Todd C. Hollon (CVPR, 2023)

Artificial-intelligence-based molecular classification of diffuse gliomas using rapid, label-free optical imaging. - Todd C. Hollon; Cheng Jiang 003; Asadur Chowdury; Mustafa Nasir-Moin; Akhil Kondepudi; Alexander Aabedi; Arjun Adapa; Wajd Al-Holou; Jason Heth; Oren Sagher; Pedro R. Lowenstein; Maria Castro; et al. (CoRR, 2023)

Super-resolution of biomedical volumes with 2D supervision. - Cheng Jiang 003; Alexander Gedeon; Yiwei Lyu; Eric Landgraf; Yufeng Zhang; Xinhai Hou; Akhil Kondepudi; Asadur Chowdury; Honglak Lee; Todd C. Hollon (CVPR Workshops, 2024)

A self-supervised framework for learning whole slide representations. - Xinhai Hou; Cheng Jiang 003; Akhil Kondepudi; Yiwei Lyu; Asadur Zaman Chowdury; Honglak Lee; Todd C. Hollon (CoRR, 2024)

Topological Data Analysis Captures Task-Driven fMRI Profiles in Individual Participants: A Classification Pipeline Based on Persistence. - Michael J. Catanzaro; Sam Rizzo; John J. Kopchick; Asadur Chowdury; David R. Rosenberg; Peter Bubenik; Vaibhav A. Diwadkar (Neuroinformatics, 2024)

Step-Calibrated Diffusion for Biomedical Optical Image Restoration. - Yiwei Lyu; Sung Jik Cha; Cheng Jiang 003; Asadur Zaman Chowdury; Xinhai Hou; Edward S. Harake; Akhil Kondepudi; Christian W. Freudiger; Honglak Lee; Todd C. Hollon (AAAI, 2025)

Foundation models for fast, label-free detection of glioma infiltration. - Akhil Kondepudi; Melike Pekmezci; Xinhai Hou; Katie Scotford; Cheng Jiang 003; Akshay Rao; Edward S. Harake; Asadur Chowdury; Wajd Al-Holou; Lin Wang; Aditya Pandey; Pedro R. Lowenstein; et al. (Nat., 2025)

Towards Scalable Language-Image Pre-training for 3D Medical Imaging. - Chenhui Zhao; Yiwei Lyu; Asadur Chowdury; Edward S. Harake; Akhil Kondepudi; Akshay Rao; Xinhai Hou; Honglak Lee; Todd C. Hollon (CoRR, 2025)

Intelligent Histology for Tumor Neurosurgery. - Xinhai Hou; Akhil Kondepudi; Cheng Jiang 003; Yiwei Lyu; Edward S. Harake; Asadur Chowdury; Anna-Katharina Meißner; Volker Neuschmelting; David Reinecke; Gina Furtjes; Georg Widhalm; Lisa Irina Koerner; et al. (CoRR, 2025)