Using a 3D virtual muscle model to link gene expression changes during myogenesis to protein spatial location in muscle. - Ashley J. Waardenberg; Antonio Reverter; Christine A. Wells; Brian P. Dalrymple (BMC Syst. Biol., 2008)

CompGO: an R package for comparing and visualizing Gene Ontology enrichment differences between DNA binding experiments. - Ashley J. Waardenberg; Samuel D. Bassett; Romaric Bouveret; Richard P. Harvey (BMC Bioinform., 2015)

Erratum to: 'CompGO: an R package for comparing and visualizing Gene Ontology enrichment differences between DNA binding experiments'. - Ashley J. Waardenberg; Samuel D. Bassett; Romaric Bouveret; Richard P. Harvey (BMC Bioinform., 2016)

Progesterone signalling in broiler skeletal muscle is associated with divergent feed efficiency. - Walter Bottje; Byung-Whi Kong; Antonio Reverter; Ashley J. Waardenberg; Kentu Lassiter; Nicholas J. Hudson 001 (BMC Syst. Biol., 2017)