The Method of Quantum Clustering. - David Horn 001; Assaf Gottlieb (NIPS, 2001)

Novel Unsupervised Feature Filtering of Biological Data. - Roy Varshavsky; Assaf Gottlieb; Michal Linial; David Horn 001 (ISMB (Supplement of Bioinformatics), 2006)

Unsupervised feature selection under perturbations: meeting the challenges of biological data. - Roy Varshavsky; Assaf Gottlieb; David Horn 001; Michal Linial (Bioinform., 2007)

Stratification of co-evolving genomic groups using ranked phylogenetic profiles. - Shiri Freilich; Leon Goldovsky; Assaf Gottlieb; Eric Blanc; Sophia Tsoka; Christos A. Ouzounis (BMC Bioinform., 2009)

UFFizi: a generic platform for ranking informative features. - Assaf Gottlieb; Roy Varshavsky; Michal Linial; David Horn 001 (BMC Bioinform., 2010)

PRINCIPLE: a tool for associating genes with diseases via network propagation. - Assaf Gottlieb; Oded Magger; Igor Berman; Eytan Ruppin; Roded Sharan (Bioinform., 2011)

Combining Drug and Gene Similarity Measures for Drug-Target Elucidation. - Liat Perlman; Assaf Gottlieb; Nir Atias; Eytan Ruppin; Roded Sharan (J. Comput. Biol., 2011)

Large-Scale Elucidation of Drug Response Pathways in Humans. - Yael Silberberg; Assaf Gottlieb; Martin Kupiec; Eytan Ruppin; Roded Sharan (J. Comput. Biol., 2012)

The New HIT: Human Health Information Technology. - Tiffany I. Leung; Mary K. Goldstein; Mark A. Musen; Ruth Cronkite; Jonathan H. Chen; Assaf Gottlieb; Eran Leitersdorf (MedInfo, 2017)

Identification of Patients with HIV from Electronic Health Records. - Sarah B. May; Thomas P. Giordano; Assaf Gottlieb (AMIA, 2020)

SCOR: A secure international informatics infrastructure to investigate COVID-19. - Jean Louis Raisaro; Francesco Marino; Juan Ramón Troncoso-Pastoriza; Raphaelle Beau-Lejdstrom; Riccardo Bellazzi; Robert Murphy; Elmer V. Bernstam; Henry Wang; Mauro Bucalo; Yong Chen 016; Assaf Gottlieb; Arif Ozgun Harmanci; et al. (J. Am. Medical Informatics Assoc., 2020)

Population stratification enables modeling effects of reopening policies on mortality and hospitalization rates. - Tongtong Huang; Yan Chu 005; Shayan Shams; Yejin Kim 001; Ananth V. Annapragada; Devika Subramanian; Ioannis A. Kakadiaris; Assaf Gottlieb; Xiaoqian Jiang (J. Biomed. Informatics, 2021)

Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. - Tsung-Ting Kuo; Anh Pham; Maxim E. Edelson; Jihoon Kim 001; Jason Chan; Yash Gupta; Lucila Ohno-Machado; David M. Anderson; Chandrasekar Balacha; Tyler Bath; Sally L. Baxter; Andrea Becker-Pennrich; et al. (J. Am. Medical Informatics Assoc., 2023)

Generalizable pipeline for constructing HIV risk prediction models across electronic health record systems. - Sarah B. May; Thomas P. Giordano; Assaf Gottlieb (J. Am. Medical Informatics Assoc., 2024)