Tracking single-cells in overcrowded bacterial colonies. - Athanasios D. Balomenos; Panagiotis Tsakanikas; Elias S. Manolakos (EMBC, 2015)

Reconstructing the forest of lineage trees of diverse bacterial communities using bio-inspired image analysis. - Athanasios D. Balomenos; Elias S. Manolakos (EUSIPCO, 2017)

Image analysis driven single-cell analytics for systems microbiology. - Athanasios D. Balomenos; Panagiotis Tsakanikas; Zafiro Aspridou; Anastasia P. Tampakaki; Konstantinos P. Koutsoumanis; Elias S. Manolakos (BMC Syst. Biol., 2017)

Bacterial Image Analysis and Single-Cell Analytics to Decipher the Behavior of Large Microbial Communities. - Athanasios D. Balomenos; Victoria Stefanou; Elias S. Manolakos (ICIP, 2018)

Analytics and visualization tools to characterize single-cell stochasticity using bacterial single-cell movie cytometry data. - Athanasios D. Balomenos; Victoria Stefanou; Elias S. Manolakos (BMC Bioinform., 2021)

Development of computational methods to investigate the stochastic dynamic behavior of microbial communities - Athanasios D. Balomenos (2021)