Bi-objective integer programming for RNA secondary structure prediction with pseudoknots. - Audrey Legendre; Eric Angel; Fariza Tahi (BMC Bioinform., 2018)

RCPred: RNA complex prediction as a constrained maximum weight clique problem. - Audrey Legendre; Eric Angel; Fariza Tahi (BMC Bioinform., 2019)

Prédiction de structures secondaires d'ARN et de complexes d'ARN avec pseudonoeuds - Approches basées sur la programmation mathématique multi-objectif. (RNA and RNA complex secondary structure prediction with pseudoknots - Multi-objective mathematical programming based approaches). - Audrey Legendre (2019)

C-RCPred: a multi-objective algorithm for interactive secondary structure prediction of RNA complexes integrating user knowledge and SHAPE data. - Mandy Ibéné; Audrey Legendre; Guillaume Postic; Eric Angel; Fariza Tahi (Briefings Bioinform., 2023)