ACPYPE update for nonuniform 1-4 scale factors: Conversion of the GLYCAM06 force field from AMBER to GROMACS. - Austen Bernardi; Roland Faller; Dirk Reith; Karl N. Kirschner (SoftwareX, 2019)

CycFlowDec: A Python module for decomposing flow networks using simple cycles. - Austen Bernardi; Jessica M. J. Swanson (SoftwareX, 2021)