RAbHIT: R Antibody Haplotype Inference Tool. - Ayelet Peres; Moriah Gidoni; Pazit Polak; Gur Yaari (Bioinform., 2019)

VDJbase: an adaptive immune receptor genotype and haplotype database. - Aviv Omer; Or Shemesh; Ayelet Peres; Pazit Polak; Adrian J. Shepherd; Corey T. Watson; Scott D. Boyd; Andrew M. Collins; William D. Lees; Gur Yaari (Nucleic Acids Res., 2020)

An unbiased comparison of immunoglobulin sequence aligners. - Thomas Konstantinovsky; Ayelet Peres; Pazit Polak; Gur Yaari (Briefings Bioinform., 2024)

Guidelines for reproducible analysis of adaptive immune receptor repertoire sequencing data. - Ayelet Peres; Vered Klein; Boaz Frankel; William D. Lees; Pazit Polak; Mark Meehan; Artur Rocha; João Correia Lopes; Gur Yaari (Briefings Bioinform., 2024)