Detecting hidden batch factors through data-adaptive adjustment for biological effects. - Haidong Yi; Ayush T. Raman; Han Zhang 017; Genevera I. Allen; Zhandong Liu (Bioinform., 2018)

Computational methods to explore chromatin state dynamics. - Elias Orouji; Ayush T. Raman (Briefings Bioinform., 2022)