B. Jayaram
Orcid: 0000-0002-5495-2213Affiliations:
- Indian Institute of Technology Delhi, Department of Chemistry, New Delhi, India
- Wesleyan University, Department of Chemistry, Middletown, CT, USA (1989 - 1990)
- Columbia University, College of Physicians and Surgeons, NY, USA (1987 - 1988)
- City University of New York, Department of Chemistry, NY, USA (PhD 1986)
According to our database1,
B. Jayaram
authored at least 23 papers
between 1997 and 2020.
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Bibliography
2020
Improving the binding affinity estimations of protein-ligand complexes using machine-learning facilitated force field method.
J. Comput. Aided Mol. Des., 2020
A novel method SEProm for prokaryotic promoter prediction based on DNA structure and energetics.
Bioinform., 2020
PvP01-DB: computational structural and functional characterization of soluble proteome of PvP01 strain of Plasmodium vivax.
Database J. Biol. Databases Curation, 2020
2019
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 1, 2019
Comput. Biol. Medicine, 2019
2018
Database J. Biol. Databases Curation, 2018
2017
A component analysis of the free energies of folding of 35 proteins: A consensus view on the thermodynamics of folding at the molecular level.
J. Comput. Chem., 2017
A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics.
Bioinform., 2017
2016
Onco-Regulon: an integrated database and software suite for site specific targeting of transcription factors of cancer genes.
Database J. Biol. Databases Curation, 2016
2015
J. Complex Networks, 2015
2014
Bhageerath-H: A homology/ab initio hybrid server for predicting tertiary structures of monomeric soluble proteins.
BMC Bioinform., 2014
2013
A homology/<i>ab initio</i> hybrid algorithm for sampling near-native protein conformations.
J. Comput. Chem., 2013
ANGDelMut - a web-based tool for predicting and analyzing functional loss mechanisms of deleterious angiogenin mutations causing amyotrophic lateral sclerosis.
F1000Research, 2013
2012
Sanjeevini: a freely accessible web-server for target directed lead molecule discovery.
BMC Bioinform., 2012
2011
<i>AADS</i> - An Automated Active Site Identification, Docking, and Scoring Protocol for Protein Targets Based on Physicochemical Descriptors.
J. Chem. Inf. Model., 2011
A fast empirical GAFF compatible partial atomic charge assignment scheme for modeling interactions of small molecules with biomolecular targets.
J. Comput. Chem., 2011
2010
Identification and Analysis of Binding Site Residues in Protein Complexes: Energy Based Approach.
Proceedings of the Advanced Intelligent Computing Theories and Applications, 2010
Bhageerath: A Web Enabled High Performance Computing (HPC) Software Suite for Predicting The Tertiary Structures of Small Globular Proteins Using all Atom Energy Based Ab initio Methods.
Proceedings of the International Conference on Bioinformatics & Computational Biology, 2010
Sequence and structural features of binding site residues in protein-protein complexes.
Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010
2006
Proceedings of the Sixth International Conference on Intelligent Systems Design and Applications (ISDA 2006), 2006
2002
Free-energy component analysis of 40 protein-DNA complexes: A consensus view on the thermodynamics of binding at the molecular level.
J. Comput. Chem., 2002
1997