. Multiscale region segmentation of images using nonlinear methods. - Balaji Iyer; Malcolm D. Macleod (VCIP, 2000)

Color image retrieval using the datasieve. - Balaji Iyer; Malcolm D. Macleod (ICASSP (2), 2005)

Easily-programmable corobots for student use. - Zack Butler 001; Max Bogue; Ravdeep Johar; Balaji Iyer (ICAR, 2013)

DeepImmuno: deep learning-empowered prediction and generation of immunogenic peptides for T-cell immunity. - Guangyuan Li; Balaji Iyer; V. B. Surya Prasath; Yizhao Ni; Nathan Salomonis (Briefings Bioinform., 2021)

maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks. - Tareian A. Cazares; Faiz W. Rizvi; Balaji Iyer; Xiaoting Chen; Michael Kotliar; Anthony T. Bejjani; Joseph A. Wayman; Omer Donmez; Benjamin Wronowski; Sreeja Parameswaran; Leah C. Kottyan; Artem Barski; et al. (PLoS Comput. Biol., 2023)

On the Performance of new Higher Order Transformation Functions for Highly Efficient Dense Layers. - Atharva Gundawar; Srishti Lodha; V. Vijayarajan; Balaji Iyer; V. B. Surya Prasath (Neural Process. Lett., 2023)

Benchmarking HEp-2 cell segmentation methods in indirect immunofluorescence images - standard models to deep learning. - Balaji Iyer; S. Deoghare; Krish Ranjan; Bruce J. Aronow; V. B. Surya Prasath (Comput. Biol. Medicine, 2025)