Label-Guided Graph Contrastive Learning for Single-Cell Fusion Clustering. - Baojuan Qin; Junliang Shang; Yan Zhao; Xiaohan Zhang; Feng Li 033; Jin-Xing Liu 001 (ISBRA (1), 2025)

PDA-GTGCN: Identification of PiRNA-Disease Associations Based on Group Feature Transformation Graph Convolutional Network. - Xiaoqi Tang; Xianghan Meng; Junliang Shang; Baojuan Qin; Xin He; Yan Zhao; Daohui Ge; Feng Li 033; Jin-Xing Liu (ISBRA (1), 2025)

scRDAN: a robust domain adaptation network for cell type annotation across single-cell RNA sequencing data. - Yan Sun; Yan Zhao; Junliang Shang; Baojuan Qin; Xiaohan Zhang; Jin-Xing Liu (Briefings Bioinform., 2025)

scCDAN: Constraint domain adaptation network for cell type annotation across single cell RNA sequencing data. - Junliang Shang; Yan Zhao; Baojuan Qin; Limin Zhang; Xianghan Meng; Daohui Ge; Jin-Xin Liu 001 (Neurocomputing, 2025)

stMHCG: High-confidence multi-view clustering for identification of spatial domains from spatially resolved transcriptomics. - Xiaohan Zhang; Junliang Shang; Yan Zhao; Baojuan Qin; Qianqian Ren; Feng Li 033; Jin-Xing Liu 001 (Neurocomputing, 2025)

pscAdapt: Pre-Trained Domain Adaptation Network Based on Structural Similarity for Cell Type Annotation in Single Cell RNA-seq Data. - Yan Zhao; Junliang Shang; Baojuan Qin; Limin Zhang; Xin He; Daohui Ge; Qianqian Ren; Jin-Xin Liu 001 (IEEE J. Biomed. Health Informatics, 2025)