Transforming a high school student project in computer science into a significant scientific achievement. - Barak Raveh; Bruria Haberman; Cecile Yehezkel (ITiCSE, 2007)

Rediscovering secondary structures as network motifs - an unsupervised learning approach. - Barak Raveh; Ofer Rahat; Ronen Basri; Gideon Schreiber (Bioinform., 2007)

Rapid Sampling of Molecular Motions with Prior Information Constraints. - Barak Raveh; Angela Enosh; Ora Schueler-Furman; Dan Halperin (PLoS Comput. Biol., 2009)

Sampling-Diagram Automata: A Tool for Analyzing Path Quality in Tree Planners. - Oren Nechushtan; Barak Raveh; Dan Halperin (WAFR, 2010)

A Little More, a Lot Better: Improving Path Quality by a Simple Path Merging Algorithm - Barak Raveh; Angela Enosh; Dan Halperin (CoRR, 2010)

Improving the Quality of Non-Holonomic Motion by Hybridizing C-PRM Paths - Itamar Berger; Bosmat Eldar; Gal Zohar; Barak Raveh; Dan Halperin (CoRR, 2010)

Rosetta FlexPepDock web server - high resolution modeling of peptide-protein interactions. - Nir London; Barak Raveh; Eyal Cohen; Guy Fathi; Ora Schueler-Furman (Nucleic Acids Res., 2011)

A Little More, a Lot Better: Improving Path Quality by a Path-Merging Algorithm. - Barak Raveh; Angela Enosh; Dan Halperin (IEEE Trans. Robotics, 2011)

Motion Planning via Manifold Samples. - Oren Salzman; Michael Hemmer; Barak Raveh; Dan Halperin (Algorithmica, 2013)

Integrative structure and functional anatomy of a nuclear pore complex. - Seung Joong Kim; Javier Fernandez-Martinez; Ilona Nudelman; Yi Shi; Wenzhu Zhang; Barak Raveh; Thurston Herricks; Brian D. Slaughter; Joanna A. Hogan; Paula Upla; Ilan E. Chemmama; Riccardo Pellarin; et al. (Nat., 2018)

Interpreting single-cell and spatial omics data using deep neural network training dynamics. - Jonathan Karin; Reshef Mintz; Barak Raveh; Mor Nitzan (Nat. Comput. Sci., 2024)

MadVoro: Parallel Construction of Voronoi Diagrams in Distributed Memory Systems. - Maor Mizrachi; Barak Raveh; Elad Steinberg (CoRR, 2025)