Middleware for Reliable Mobile Medical Workflow Support in Disaster Settings. - Steven W. Brown; William G. Griswold; Barry Demchak; Leslie A. Lenert (AMIA, 2006)

Situational Awareness During Mass-Casualty Events: Command and Control. - Barry Demchak; Theodore C. Chan; William G. Griswold; Leslie Lenert (AMIA, 2006)

Data Quality for Situational Awareness during Mass-Casualty Events. - Barry Demchak; William G. Griswold; Leslie A. Lenert (AMIA, 2007)

A Rich Services Approach to CoCoME. - Barry Demchak; Vina Ermagan; Emilia Farcas; To-ju Huang; Ingolf H. Krüger; Massimiliano Menarini (CoCoME, 2007)

Rich Services: The Integration Piece of the SOA Puzzle. - Matthew Arrott; Barry Demchak; Vina Ermagan; Claudiu Farcas; Emilia Farcas; Ingolf H. Krüger; Massimiliano Menarini (ICWS, 2007)

The Treasure Map for Rich Services. - Barry Demchak; Claudiu Farcas; Emilia Farcas; Ingolf H. Krüger (IRI, 2007)

Rich services: addressing challenges of ultra-large-scale software-intensive systems. - Barry Demchak; Vina Ermagan; Claudiu Farcas; Emilia Farcas; Ingolf H. Krüger; Massimiliano Menarini (ULSSIS@ICSE, 2008)

Dynamic Service Composition and Deployment with OpenRichServices. - Ingolf Krüger; Barry Demchak; Massimiliano Menarini (Software Service and Application Engineering, 2012)

PALMS: A Modern Coevolution of Community and Computing Using Policy Driven Development. - Barry Demchak; Jacqueline Kerr; Fred Raab; Kevin Patrick; Ingolf H. Krüger (HICSS, 2012)

Policy Driven Development: Flexible Policy Insertion for Large Scale Systems. - Barry Demchak; Ingolf Krüger (POLICY, 2012)

Policy driven development : SOA evolvability through late binding. - Barry Demchak (2013)

Cytoscape: the network visualization tool for GenomeSpace workflows. - Barry Demchak; Tim Hull; Michael Reich; Ted Liefeld; Michael E. Smoot; Trey Ideker; Jill P. Mesirov (F1000Research, 2014)

Cytoscape tools for the web age: D3.js and Cytoscape.js exporters. - Keiichiro Ono; Barry Demchak; Trey Ideker (F1000Research, 2014)

The Cytoscape app article collection. - Alexander R. Pico; Gary D. Bader; Barry Demchak; Oriol Guitart Pla; Timothy Hull; William J. R. Longabaugh; Christian Tannus Lopes; Samad Lotia; Piet Molenaar; Jason Montojo; John H. Morris; Keiichiro Ono; et al. (F1000Research, 2014)

Porting and using PanGIA for Cytoscape 3: challenges and solutions. - David Welker; Barry Demchak (F1000Research, 2014)

NeXO Web: the NeXO ontology database and visualization platform. - Janusz Dutkowski; Keiichiro Ono; Michael Kramer; Michael Yu; Dexter Pratt; Barry Demchak; Trey Ideker (Nucleic Acids Res., 2014)

cyNeo4j: connecting Neo4j and Cytoscape. - Georg Summer; Thomas Kelder; Keiichiro Ono; Marijana Radonjic; Stephane Heymans; Barry Demchak (Bioinform., 2015)

CyREST: Turbocharging Cytoscape Access for External Tools via a RESTful API. - Keiichiro Ono; Tanja Muetze; Georgi Kolishovski; Paul Shannon; Barry Demchak (F1000Research, 2015)

dot-app: a Graphviz-Cytoscape conversion plug-in. - Braxton Fitts; Ziran Zhang; Massoud Maher; Barry Demchak (F1000Research, 2016)

Network propagation in the cytoscape cyberinfrastructure. - Daniel E. Carlin; Barry Demchak; Dexter Pratt; Eric Sage; Trey Ideker (PLoS Comput. Biol., 2017)

The Cytoscape Automation app article collection. - Barry Demchak; David Otasek; Alexander R. Pico; Gary D. Bader; Keiichiro Ono; Brett Settle; Eric Sage; John H. Morris; William J. R. Longabaugh; Christian Tannus Lopes; Michael Kucera; Adam Treister; et al. (F1000Research, 2018)

Copycat Layout: Network layout alignment via Cytoscape Automation. - Brett Settle; David Otasek; John H. Morris; Barry Demchak (F1000Research, 2018)

aMatReader: Importing adjacency matrices via Cytoscape Automation. - Brett Settle; David Otasek; John H. Morris; Barry Demchak (F1000Research, 2018)

RCy3: Network biology using Cytoscape from within R. - Julia A. Gustavsen; Shraddha Pai; Ruth Isserlin; Barry Demchak; Alexander R. Pico (F1000Research, 2019)