Bio3d: an R package for the comparative analysis of protein structures. - Barry J. Grant; Ana P. C. Rodrigues; Karim M. ElSawy; James Andrew McCammon; Leo S. D. Caves (Bioinform., 2006)

sgTarget: a target selection resource for structural genomics. - Ana P. C. Rodrigues; Barry J. Grant; Roderick E. Hubbard (Nucleic Acids Res., 2006)

Targeted Molecular Dynamics Study of C-Loop Closure and Channel Gating in Nicotinic Receptors. - Xiaolin Cheng; Hai-Long Wang; Barry J. Grant; Steven M. Sine; James Andrew McCammon (PLoS Comput. Biol., 2006)

The 2006 Automated Function Prediction Meeting. - Ana P. C. Rodrigues; Barry J. Grant; Adam Godzik; Iddo Friedberg (BMC Bioinform., 2007)

Ras Conformational Switching: Simulating Nucleotide-Dependent Conformational Transitions with Accelerated Molecular Dynamics. - Barry J. Grant; Alemayehu A. Gorfe; James Andrew McCammon (PLoS Comput. Biol., 2009)

The Distinct Conformational Dynamics of K-Ras and H-Ras A59G. - Suryani Lukman; Barry J. Grant; Alemayehu A. Gorfe; Guy H. Grant; James Andrew McCammon (PLoS Comput. Biol., 2010)

Accessing a Hidden Conformation of the Maltose Binding Protein Using Accelerated Molecular Dynamics. - Denis Bucher; Barry J. Grant; Phineus R. Markwick; James Andrew McCammon (PLoS Comput. Biol., 2011)

Large-Scale Conformational Changes of Trypanosoma cruzi Proline Racemase Predicted by Accelerated Molecular Dynamics Simulation. - César Augusto F. de Oliveira; Barry J. Grant; Michelle Zhou; James Andrew McCammon (PLoS Comput. Biol., 2011)

Conformational Sampling and Nucleotide-Dependent Transitions of the GroEL Subunit Probed by Unbiased Molecular Dynamics Simulations. - Lars Skjaerven; Barry J. Grant; Arturo Muga; Knut Teigen; James Andrew McCammon; Nathalie Reuter; Aurora Martinez (PLoS Comput. Biol., 2011)

Mapping the Structural and Dynamical Features of Kinesin Motor Domains. - Guido Scarabelli; Barry J. Grant (PLoS Comput. Biol., 2013)

Integrating protein structural dynamics and evolutionary analysis with Bio3D. - Lars Skjærven; Xin-Qiu Yao; Guido Scarabelli; Barry J. Grant (BMC Bioinform., 2014)

Online interactive analysis of protein structure ensembles with Bio3D-web. - Lars Skjærven; Shashank Jariwala; Xin-Qiu Yao; Barry J. Grant (Bioinform., 2016)

Comparative structural dynamic analysis of GTPases. - Hongyang Li; Xin-Qiu Yao; Barry J. Grant (PLoS Comput. Biol., 2018)