Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction. - A. Dhanasekaran; Jon L. Pearson; Balasubramanian Ganesan; Bart C. Weimer (BMC Bioinform., 2015)

Design of the MCAW compute service for food safety bioinformatics. - Stefan Edlund; Kristen L. Beck; Niina Haiminen; Laxmi Parida; Brian D. Storey; Bart C. Weimer; James H. Kaufman; David D. Chambliss (IBM J. Res. Dev., 2016)

Defining the food microbiome for authentication, safety, and process management. - Bart C. Weimer; Brian D. Storey; C. A. Elkins; Robert C. Baker; Peter Markwell; David D. Chambliss; Stefan Edlund; James H. Kaufman (IBM J. Res. Dev., 2016)

Exploiting Functional Context in Biology: Reconsidering Classification of Bacterial Life. - James H. Kaufman; Ed Seabolt; Mark Kunitomi; Akshay Agarwal 002; Kristen L. Beck; Harsha Krishnareddy; Bart C. Weimer (ICDE Workshops, 2018)

Predicting Escherichia coli levels in manure using machine learning in weeping wall and mechanical liquid solid separation systems. - B. Dharmaveer Shetty; Noha Amaly; Bart C. Weimer; Pramod Pandey (Frontiers Artif. Intell., 2022)