A program generating homogeneous random graphs with given weights. - L. Bogacz; Zdzislaw Burda; Wolfhard Janke; Bartlomiej Waclaw (Comput. Phys. Commun., 2005)

A spatial model predicts that dispersal and cell turnover limit intratumour heterogeneity. - Bartlomiej Waclaw; Ivana Bozic; Meredith E. Pittman; Ralph H. Hruban; Bert Vogelstein; Martin A. Nowak (Nat., 2015)

Beyond the Hypercube: Evolutionary Accessibility of Fitness Landscapes with Realistic Mutational Networks. - Marcin Zagórski; Zdzislaw Burda; Bartlomiej Waclaw (PLoS Comput. Biol., 2016)

On measuring selection in cancer from subclonal mutation frequencies. - Ivana Bozic; Chay Paterson; Bartlomiej Waclaw (PLoS Comput. Biol., 2019)

Phenotypic delay in the evolution of bacterial antibiotic resistance: Mechanistic models and their implications. - Martín Carballo-Pacheco; Michael D. Nicholson; Elin E. Lilja; Rosalind J. Allen; Bartlomiej Waclaw (PLoS Comput. Biol., 2020)