Accelerating the reconstruction of genome-scale metabolic networks. - Richard A. Notebaart; Frank H. J. van Enckevort; Christof Francke; Roland J. Siezen; Bas Teusink (BMC Bioinform., 2006)

Co-Regulation of Metabolic Genes Is Better Explained by Flux Coupling Than by Network Distance. - Richard A. Notebaart; Bas Teusink; Roland J. Siezen; Balázs Papp (PLoS Comput. Biol., 2008)

Understanding the Adaptive Growth Strategy of Lactobacillus plantarum by In Silico Optimisation. - Bas Teusink; Anne Wiersma; Leo Jacobs; Richard A. Notebaart; Eddy J. Smid (PLoS Comput. Biol., 2009)

Predicting Metabolic Fluxes Using Gene Expression Differences As Constraints. - Rogier J. P. van Berlo; Dick de Ridder; Jean-Marc Daran; Pascale A. S. Daran-Lapujade; Bas Teusink; Marcel J. T. Reinders (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

FAME, the Flux Analysis and Modeling Environment. - Joost Boele; Brett G. Olivier; Bas Teusink (BMC Syst. Biol., 2012)

Bioinformatics and Systems Biology: bridging the gap between heterogeneous student backgrounds. - Sanne Abeln; Douwe Molenaar; K. Anton Feenstra; Huub C. J. Hoefsloot; Bas Teusink; Jaap Heringa (Briefings Bioinform., 2013)

Interplay between Constraints, Objectives, and Optimality for Genome-Scale Stoichiometric Models. - Timo R. Maarleveld; Meike T. Wortel; Brett G. Olivier; Bas Teusink; Frank J. Bruggeman (PLoS Comput. Biol., 2015)

Modelling? Using Standards Can Help You. - Brett G. Olivier; Bas Teusink (ERCIM News, 2016)

An Integrated Model Quantitatively Describing Metabolism, Growth and Cell Cycle in Budding Yeast. - Pasquale Palumbo; Marco Vanoni; Federico Papa; Stefano Busti; Meike T. Wortel; Bas Teusink; Lilia Alberghina (WIVACE, 2017)

Training for translation between disciplines: a philosophy for life and data sciences curricula. - K. Anton Feenstra; Sanne Abeln; Johan A. Westerhuis; Filipe Brancos dos Santos; Douwe Molenaar; Bas Teusink; Huub C. J. Hoefsloot; Jaap Heringa (Bioinform., 2018)

Dynamic elementary mode modelling of non-steady state flux data. - Abel Folch-Fortuny; Bas Teusink; Huub C. J. Hoefsloot; Age K. Smilde; Alberto Ferrer 001 (BMC Syst. Biol., 2018)

Maintaining maximal metabolic flux by gene expression control. - Robert Planqué; Josephus Hulshof; Bas Teusink; Johannes C. Hendriks; Frank J. Bruggeman (PLoS Comput. Biol., 2018)

The number of active metabolic pathways is bounded by the number of cellular constraints at maximal metabolic rates. - Daan H. de Groot; Coco van Boxtel; Robert Planqué; Frank J. Bruggeman; Bas Teusink (PLoS Comput. Biol., 2019)

Elementary Growth Modes provide a molecular description of cellular self-fabrication. - Daan H. de Groot; Josephus Hulshof; Bas Teusink; Frank J. Bruggeman; Robert Planqué (PLoS Comput. Biol., 2020)

Unlocking Elementary Conversion Modes: ecmtool Unveils All Capabilities of Metabolic Networks. - Tom J. Clement; Erik B. Baalhuis; Bas Teusink; Frank J. Bruggeman; Robert Planqué; Daan H. de Groot (Patterns, 2021)

Whole-cell metabolic control analysis. - Frank J. Bruggeman; Maaike Remeijer; Maarten Droste; Luis Salinas; Meike T. Wortel; Robert Planqué; Herbert M. Sauro; Bas Teusink; Hans V. Westerhoff (Biosyst., 2023)