sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression. - Ernesto Aparicio-Puerta; Ricardo Lebrón; Antonio Rueda; Cristina Gómez-Martín; Stavros Giannoukakos; David Jáspez; José María Medina; Andreja Zubkovic; Igor Jurak; Bastian Fromm; Juan Antonio Marchal; José L. Oliver; et al. (Nucleic Acids Res., 2019)

Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API. - Thomas Desvignes; Phillipe Loher; Karen Eilbeck; Jeffery Ma; Gianvito Urgese; Bastian Fromm; Jason Sydes; Ernesto Aparicio-Puerta; Víctor Barrera; Roderic Espín; Florian Thibord; Xavier Bofill-De Ros; et al. (Bioinform., 2020)

MirGeneDB 2.0: the metazoan microRNA complement. - Bastian Fromm; Diana Domanska; Eirik Høye; Vladimir Ovchinnikov; Wenjing Kang; Ernesto Aparicio-Puerta; Morten Johansen; Kjersti Flatmark; Anthony Mathelier; Eivind Hovig; Michael Hackenberg; Marc R. Friedländer; et al. (Nucleic Acids Res., 2020)

RNAcentral 2021: secondary structure integration, improved sequence search and new member databases. - Blake A. Sweeney; Anton I. Petrov; Carlos Eduardo Ribas; Robert D. Finn; Alex Bateman; Maciej Szymanski; Wojciech M. Karlowski; Stefan E. Seemann; Jan Gorodkin; Jamie J. Cannone; Robin Ray Gutell; Simon Kay; et al. (Nucleic Acids Res., 2021)

sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms. - Ernesto Aparicio-Puerta; Cristina Gómez-Martín; Stavros Giannoukakos; José María Medina; Chantal Scheepbouwer; Adrián García-Moreno; Pedro Carmona-Saez; Bastian Fromm; Michiel Pegtel; Andreas Keller; Juan Antonio Marchal; Michael Hackenberg (Nucleic Acids Res., 2022)

MirGeneDB 2.1: toward a complete sampling of all major animal phyla. - Bastian Fromm; Eirik Høye; Diana Domanska; Xiangfu Zhong; Ernesto Aparicio-Puerta; Vladimir Ovchinnikov; Sinan U. Umu; Peter J. Chabot; Wenjing Kang; Morteza Aslanzadeh; Marcel Tarbier; Emilio Mármol-Sánchez; et al. (Nucleic Acids Res., 2022)