Performance analysis of a PDEVS simulator supporting multiple synchronization protocols. - Ben Cardoen; Stijn Manhaeve; Tim Tuijn; Yentl Van Tendeloo; Kurt Vanmechelen; Hans Vangheluwe; Jan Broeckhove (SpringSim (TMS-DEVS), 2016)

A PDEVS simulator supporting multiple synchronization protocols: implementation and performance analysis. - Ben Cardoen; Stijn Manhaeve; Yentl Van Tendeloo; Jan Broeckhove (Simul., 2018)

Limited-Angle Diffuse Optical Tomography Image Reconstruction Using Deep Learning. - Hanene Ben Yedder; Majid Shokoufi; Ben Cardoen; Farid Golnaraghi; Ghassan Hamarneh (MICCAI (1), 2019)

ERGO: Efficient Recurrent Graph Optimized Emitter Density Estimation in Single Molecule Localization Microscopy. - Ben Cardoen; Hanene Ben Yedder; Anmol Sharma; Keng C. Chou; Ivan Robert Nabi; Ghassan Hamarneh (IEEE Trans. Medical Imaging, 2020)

Deep learning for biomedical image reconstruction: a survey. - Hanene Ben Yedder; Ben Cardoen; Ghassan Hamarneh (Artif. Intell. Rev., 2021)

Multitask Deep Learning Reconstruction and Localization of Lesions in Limited Angle Diffuse Optical Tomography. - Hanene Ben Yedder; Ben Cardoen; Majid Shokoufi; Farid Golnaraghi; Ghassan Hamarneh (IEEE Trans. Medical Imaging, 2022)

AI-based analysis of super-resolution microscopy: Biological discovery in the absence of ground truth. - Ivan Robert Nabi; Ben Cardoen; Ismail M. Khater; Guang Gao; Timothy H. Wong; Ghassan Hamarneh (CoRR, 2023)

LogParadox. - Ben Cardoen; Hanene Ben Yedder; Sieun Lee; Ivan Robert Nabi; Ghassan Hamarneh (Zenodo, 2023)

Deep orthogonal multi-wavelength fusion for tomogram-free diagnosis in diffuse optical imaging. - Hanene Ben Yedder; Ben Cardoen; Majid Shokoufi; Farid Golnaraghi; Ghassan Hamarneh (Comput. Biol. Medicine, 2024)

Closing the multichannel gap through computational reconstruction of interaction in super-resolution microscopy. - Ben Cardoen; Hanene Ben Yedder; Ivan Robert Nabi; Ghassan Hamarneh (Patterns, 2025)

SuperResNET: Model-Free Single-Molecule Network Analysis Software Achieves Molecular Resolution of Nup96. - Yahongyang Lydia Li; Ismail M. Khater; Christian Hallgrimson; Ben Cardoen; Timothy H. Wong; Ghassan Hamarneh; Ivan Robert Nabi (Adv. Intell. Syst., 2025)