Symmetry in complex networks. - Ben D. MacArthur; Rubén J. Sánchez-García; James W. Anderson (Discret. Appl. Math., 2008)

GATE: software for the analysis and visualization of high-dimensional time series expression data. - Ben D. MacArthur; Alexander Lachmann; Ihor Lemischka; Avi Ma'ayan (Bioinform., 2010)

GenePy - a score for estimating gene pathogenicity in individuals using next-generation sequencing data. - Enrico Mossotto; J. J. Ashton; L. O'Gorman; Reuben J. Pengelly; R. M. Beattie; Ben D. MacArthur; Sarah Ennis (BMC Bioinform., 2019)

A systematic review of the applications of artificial intelligence and machine learning in autoimmune diseases. - Imogen S. Stafford; Melina Kellermann; Enrico Mossotto; R. M. Beattie; Ben D. MacArthur; Sarah Ennis (npj Digit. Medicine, 2020)

Geometry and symmetry in biochemical reaction systems. - Raffaella Mulas; Rubén J. Sánchez-García; Ben D. MacArthur (Theory Biosci., 2021)

Learning from data with structured missingness. - Robin Mitra; Sarah F. McGough; Tapabrata Chakraborti; Chris C. Holmes; Ryan Copping; Niels Hagenbuch; Stefanie Biedermann; Jack Noonan; Brieuc Lehmann; Aditi Shenvi; Xuan Vinh Doan; David Leslie; et al. (Nat. Mac. Intell., 2023)

An information-theoretic approach to single cell sequencing analysis. - Michael J. Casey; Jörg Fliege; Rubén J. Sánchez-García; Ben D. MacArthur (BMC Bioinform., 2023)

Deep Learning as Ricci Flow. - Anthony Baptista; Alessandro Barp; Tapabrata Chakraborti; Chris Harbron; Ben D. MacArthur; Christopher R. S. Banerji (CoRR, 2024)

Mining higher-order triadic interactions. - Anthony Baptista; Marta Niedostatek; Jun Yamamoto; Ben D. MacArthur; Jürgen Kurths; Rubén J. Sánchez-García; Ginestra Bianconi (CoRR, 2024)

Personalized uncertainty quantification in artificial intelligence. - Tapabrata Chakraborti; Christopher R. S. Banerji; Ariane Marandon; Vicky Hellon; Robin Mitra; Brieuc Lehmann; Leandra Bräuninger; Sarah F. McGough; Cagatay Turkay; Alejandro F. Frangi; Ginestra Bianconi; Weizi Li; et al. (Nat. Mac. Intell., 2025)

Leakage and Interpretability in Concept-Based Models. - Enrico Parisini; Tapabrata Chakraborti; Chris Harbron; Ben D. MacArthur; Christopher R. S. Banerji (CoRR, 2025)