Quantifying Type-Specific Reproduction Numbers for Nosocomial Pathogens: Evidence for Heightened Transmission of an Asian Sequence Type 239 MRSA Clone. - Ben S. Cooper; Theodore Kypraios; Rahul Batra; Duncan Wyncoll; Olga Tosas; Jonathan D. Edgeworth (PLoS Comput. Biol., 2012)

Probabilistic transmission models incorporating sequencing data for healthcare-associated Clostridioides difficile outperform heuristic rules and identify strain-specific differences in transmission. - David W. Eyre; Mirjam Laager; A. Sarah Walker; Ben S. Cooper; Daniel J. Wilson 001 (PLoS Comput. Biol., 2021)