The Autapse: A Simple Illustration of Short-Term Analog Memory Storage by Tuned Synaptic Feedback. - H. Sebastian Seung; Daniel D. Lee; Ben Y. Reis; David W. Tank (J. Comput. Neurosci., 2000)

Comparing the Similarity of Time-Series Gene Expression Using Signal Processing Metrics. - Atul J. Butte; Ling Bao; Ben Y. Reis; Timothy W. Watkins; Isaac S. Kohane (J. Biomed. Informatics, 2001)

Extracting Knowledge from Dynamics in Gene Expression. - Ben Y. Reis; Atul J. Butte; Isaac S. Kohane (J. Biomed. Informatics, 2001)

Reply. - Ben Y. Reis; Atul J. Butte; Isaac S. Kohane (J. Biomed. Informatics, 2001)

Defining Expected Daily Emergency Department Utilization Rates for Detection of Bioterrorist Attacks. - Ben Y. Reis; Kenneth D. Mandl (AMIA, 2002)

Integrating Syndromic Surveillance Data across Multiple Locations: Effects on Outbreak Detection Performance. - Ben Y. Reis; Kenneth D. Mandl (AMIA, 2003)

Time series modeling for syndromic surveillance. - Ben Y. Reis; Kenneth D. Mandl (BMC Medical Informatics Decis. Mak., 2003)

Research paper: Linking Surveillance to Action: Incorporation of Real-time Regional Data into a Medical Decision Rule. - Andrew M. Fine; Lise E. Nigrovic; Ben Y. Reis; E. Francis Cook; Kenneth D. Mandl (J. Am. Medical Informatics Assoc., 2007)

Model Formulation: A Self-scaling, Distributed Information Architecture for Public Health, Research, and Clinical Care. - Andrew J. McMurry; Clint A. Gilbert; Ben Y. Reis; Henry C. Chueh; Isaac S. Kohane; Kenneth D. Mandl (J. Am. Medical Informatics Assoc., 2007)

Application of Information Technology: AEGIS: A Robust and Scalable Real-time Public Health Surveillance System. - Ben Y. Reis; Chaim Kirby; Lucy E. Hadden; Karen L. Olson; Andrew J. McMurry; James B. Daniel; Kenneth D. Mandl (J. Am. Medical Informatics Assoc., 2007)

Model Formulation: HealthMap: Global Infectious Disease Monitoring through Automated Classification and Visualization of Internet Media Reports. - Clark C. Freifeld; Kenneth D. Mandl; Ben Y. Reis; John S. Brownstein (J. Am. Medical Informatics Assoc., 2008)

Research paper: Use of population health data to refine diagnostic decision-making for pertussis. - Andrew M. Fine; Ben Y. Reis; Lise E. Nigrovic; Donald A. Goldmann; Tracy N. LaPorte; Karen L. Olson; Kenneth D. Mandl (J. Am. Medical Informatics Assoc., 2010)

Improved de-identification of physician notes through integrative modeling of both public and private medical text. - Andrew J. McMurry; Britt Fitch; Guergana Savova; Isaac S. Kohane; Ben Y. Reis (BMC Medical Informatics Decis. Mak., 2013)

Concordance and predictive value of two adverse drug event data sets. - Aurel Cami; Ben Y. Reis (BMC Medical Informatics Decis. Mak., 2014)

Internet search patterns reveal firearm sales, policies, and deaths. - John S. Brownstein; Adam D. Nahari; Ben Y. Reis (npj Digit. Medicine, 2020)

Prediction of patient disposition: comparison of computer and human approaches and a proposed synthesis. - Yuval Barak-Corren; Isha Agarwal; Kenneth A. Michelson; Todd W. Lyons; Mark I Neuman; Susan C. Lipsett; Amir A. Kimia; Matthew A. Eisenberg; Andrew J. Capraro; Jason A. Levy; Joel D. Hudgins; Ben Y. Reis; et al. (J. Am. Medical Informatics Assoc., 2021)

Temporally informed random forests for suicide risk prediction. - Ilkin Bayramli; Victor M. Castro; Yuval Barak-Corren; Emily M. Madsen; Matthew K. Nock; Jordan W. Smoller; Ben Y. Reis (J. Am. Medical Informatics Assoc., 2021)

Prediction across healthcare settings: a case study in predicting emergency department disposition. - Yuval Barak-Corren; Pradip Chaudhari; Jessica Perniciaro; Mark Waltzman; Andrew M. Fine; Ben Y. Reis (npj Digit. Medicine, 2021)

Internet search patterns reveal clinical course of COVID-19 disease progression and pandemic spread across 32 countries. - Tina Lu; Ben Y. Reis (npj Digit. Medicine, 2021)

A SMART on FHIR Application to Improve Suicide Risk Prediction and Management. - William J. Gordon; Kate Bentley; Amy Fitzpatrick; Brian Kaney; Ronald Kessler; Matthew K. Nock; Ben Y. Reis; Mark Schechter; Vicki Strateman; Dewar Tan; Sarah Young; Jordan W. Smoller (AMIA, 2022)

Predictive structured-unstructured interactions in EHR models: A case study of suicide prediction. - Ilkin Bayramli; Victor M. Castro; Yuval Barak-Corren; Emily M. Madsen; Matthew K. Nock; Jordan W. Smoller; Ben Y. Reis (npj Digit. Medicine, 2022)

The language of crisis: spatiotemporal effects of COVID-19 pandemic dynamics on health crisis communications by political leaders. - Benjamin J. Mandl; Ben Y. Reis (npj Digit. Medicine, 2022)

An integrated framework for identifying clinical-laboratory indicators for novel pandemics: COVID-19 and MIS-C. - Adam D. Nahari; Mary Beth F. Son; Jane W. Newburger; Ben Y. Reis (npj Digit. Medicine, 2022)

The value of parental medical records for the prediction of diabetes and cardiovascular disease: a novel method for generating and incorporating family histories. - Yuval Barak-Corren; David Tsurel; Daphna Keidar; Ilan Gofer; Dafna Shahaf; Maya Leventer-Roberts; Noam Barda; Ben Y. Reis (J. Am. Medical Informatics Assoc., 2023)

One Patient, Many Contexts: Scaling Medical AI Through Contextual Intelligence. - Michelle M. Li; Ben Y. Reis; Adam Rodman; Tianxi Cai; Noa Dagan; Ran D. Balicer; Joseph Loscalzo; Isaac S. Kohane; Marinka Zitnik (CoRR, 2025)

Towards Integrated Alignment. - Ben Y. Reis; William G. La Cava (CoRR, 2025)