SIMAP - structuring the network of protein similarities. - Thomas Rattei; Patrick Tischler; Roland Arnold; Franz Hamberger; Jörg Krebs; Jan Krumsiek; Benedikt Wachinger; Volker Stümpflen; Hans-Werner Mewes (Nucleic Acids Res., 2008)

Next generation knowledge extraction from biomedical literature with semantic big data approaches. - Benedikt Wachinger (2013)

Negatome 2.0: a database of non-interacting proteins derived by literature mining, manual annotation and protein structure analysis. - Philipp Blohm; Goar Frishman; Pawel Smialowski; Florian Goebels; Benedikt Wachinger; Andreas Ruepp; Dmitrij Frishman (Nucleic Acids Res., 2014)