Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems. - Benjamin Ballnus; Sabine Hug; Kathrin Hatz; Linus Görlitz; Jan Hasenauer; Fabian J. Theis (BMC Syst. Biol., 2017)

Bayesian parameter estimation for biochemical reaction networks using region-based adaptive parallel tempering. - Benjamin Ballnus; Steffen Schaper; Fabian J. Theis; Jan Hasenauer (Bioinform., 2018)

PESTO: Parameter EStimation TOolbox. - Paul Stapor; Daniel Weindl; Benjamin Ballnus; Sabine Hug; Carolin Loos; Anna Fiedler; Sabrina Krause; Sabrina Hross; Fabian Fröhlich; Jan Hasenauer (Bioinform., 2018)