Expanded protein information at SGD: new pages and proteome browser. - Robert S. Nash; Shuai Weng; Benjamin C. Hitz; Rama Balakrishnan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Eurie L. Hong; Michael S. Livstone; et al. (Nucleic Acids Res., 2007)

Gene Ontology annotations at SGD: new data sources and annotation methods. - Eurie L. Hong; Rama Balakrishnan; Qing Dong; Karen R. Christie; Julie Park; Gail Binkley; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; Benjamin C. Hitz; et al. (Nucleic Acids Res., 2008)

New mutant phenotype data curation system in the Saccharomyces Genome Database. - Maria C. Costanzo; Marek S. Skrzypek; Robert S. Nash; Edith D. Wong; Gail Binkley; Stacia R. Engel; Benjamin C. Hitz; Eurie L. Hong; J. Michael Cherry (Database J. Biol. Databases Curation, 2009)

Saccharomyces Genome Database provides mutant phenotype data. - Stacia R. Engel; Rama Balakrishnan; Gail Binkley; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Dianna G. Fisk; Jodi E. Hirschman; Benjamin C. Hitz; Eurie L. Hong; Cynthia J. Krieger; Michael S. Livstone; et al. (Nucleic Acids Res., 2010)

YeastMine - an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit. - Rama Balakrishnan; Julie Park; Kalpana Karra; Benjamin C. Hitz; Gail Binkley; Eurie L. Hong; Julie M. Sullivan; Gos Micklem; J. Michael Cherry (Database J. Biol. Databases Curation, 2012)

Saccharomyces Genome Database: the genomics resource of budding yeast. - J. Michael Cherry; Eurie L. Hong; Craig Amundsen; Rama Balakrishnan; Gail Binkley; Esther T. Chan; Karen R. Christie; Maria C. Costanzo; Selina S. Dwight; Stacia R. Engel; Dianna G. Fisk; Jodi E. Hirschman; et al. (Nucleic Acids Res., 2012)

The YeastGenome app: the Saccharomyces Genome Database at your fingertips. - Edith D. Wong; Kalpana Karra; Benjamin C. Hitz; Eurie L. Hong; J. Michael Cherry (Database J. Biol. Databases Curation, 2013)

Saccharomyces genome database provides new regulation data. - Maria C. Costanzo; Stacia R. Engel; Edith D. Wong; Paul Lloyd; Kalpana Karra; Esther T. Chan; Shuai Weng; Kelley M. Paskov; Greg R. Roe; Gail Binkley; Benjamin C. Hitz; J. Michael Cherry (Nucleic Acids Res., 2014)

Ontology application and use at the ENCODE DCC. - Venkat S. Malladi; Drew T. Erickson; Nikhil R. Podduturi; Laurence D. Rowe; Esther T. Chan; Jean M. Davidson; Benjamin C. Hitz; Marcus Ho; Brian T. Lee; Stuart R. Miyasato; Greg R. Roe; Matt Simison; et al. (Database J. Biol. Databases Curation, 2015)

Principles of metadata organization at the ENCODE data coordination center. - Eurie L. Hong; Cricket A. Sloan; Esther T. Chan; Jean M. Davidson; Venkat S. Malladi; J. Seth Strattan; Benjamin C. Hitz; Idan Gabdank; Aditi K. Narayanan; Marcus Ho; Brian T. Lee; Laurence D. Rowe; et al. (Database J. Biol. Databases Curation, 2016)

Integration of new alternative reference strain genome sequences into the Saccharomyces genome database. - Giltae Song; Rama Balakrishnan; Gail Binkley; Maria C. Costanzo; Kyla S. Dalusag; Janos Demeter; Stacia R. Engel; Sage T. Hellerstedt; Kalpana Karra; Benjamin C. Hitz; Robert S. Nash; Kelley M. Paskov; et al. (Database J. Biol. Databases Curation, 2016)

The Saccharomyces Genome Database Variant Viewer. - Travis K. Sheppard; Benjamin C. Hitz; Stacia R. Engel; Giltae Song; Rama Balakrishnan; Gail Binkley; Maria C. Costanzo; Kyla S. Dalusag; Janos Demeter; Sage T. Hellerstedt; Kalpana Karra; Robert S. Nash; et al. (Nucleic Acids Res., 2016)

ENCODE data at the ENCODE portal. - Cricket A. Sloan; Esther T. Chan; Jean M. Davidson; Venkat S. Malladi; J. Seth Strattan; Benjamin C. Hitz; Idan Gabdank; Aditi K. Narayanan; Marcus Ho; Brian T. Lee; Laurence D. Rowe; Timothy R. Dreszer; et al. (Nucleic Acids Res., 2016)

Prevention of data duplication for high throughput sequencing repositories. - Idan Gabdank; Esther T. Chan; Jean M. Davidson; Jason A. Hilton; Carrie A. Davis; Ulugbek K. Baymuradov; Aditi K. Narayanan; Kathrina C. Onate; Keenan Graham; Stuart R. Miyasato; Timothy R. Dreszer; J. Seth Strattan; et al. (Database J. Biol. Databases Curation, 2018)

The Encyclopedia of DNA elements (ENCODE): data portal update. - Carrie A. Davis; Benjamin C. Hitz; Cricket A. Sloan; Esther T. Chan; Jean M. Davidson; Idan Gabdank; Jason A. Hilton; Kriti Jain; Ulugbek K. Baymuradov; Aditi K. Narayanan; Kathrina C. Onate; Keenan Graham; et al. (Nucleic Acids Res., 2018)

New developments on the Encyclopedia of DNA Elements (ENCODE) data portal. - Yunhai Luo; Benjamin C. Hitz; Idan Gabdank; Jason A. Hilton; Meenakshi S. Kagda; Bonita Lam; Zachary A. Myers; Paul Sud; Jennifer Jou; Khine Lin; Ulugbek K. Baymuradov; Keenan Graham; et al. (Nucleic Acids Res., 2020)

Data navigation on the ENCODE portal. - Meenakshi S. Kagda; Bonita Lam; Casey Litton; Corinn Small; Cricket A. Sloan; Emma Spragins; Forrest Tanaka; Ian Whaling; Idan Gabdank; Ingrid Youngworth; J. Seth Strattan; Jason A. Hilton; et al. (CoRR, 2023)

RNAget: an API to securely retrieve RNA quantifications. - Sean Upchurch; Emilio Palumbo; Jeremy Adams; David Bujold; Guillaume Bourque; Jared Nedzel; Keenan Graham; Meenakshi S. Kagda; Pedro Assis; Benjamin C. Hitz; Emilio Righi; Roderic Guigó; et al. (Bioinform., 2023)