Exploring Extensions to Machine-learning based Gene Normalisation. - Benjamin Goudey; Nicola Stokes; David Martínez 001 (ALTA, 2007)

Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm. - Benjamin Goudey; Qiao Wang; Dave Rawlinson 001; Armita Zarnegar; Eder Kikianty; John Markham; Geoff MacIntyre; Gad Abraham; Linda Stern; Michael Inouye; Izhak Haviv; Adam Kowalczyk (BMC Bioinform., 2011)

Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results. - Matthias Reumann; Enes Makalic; Benjamin W. Goudey; Michael Inouye; Adrian Bickerstaffe; Minh Bui; Daniel J. Park; Miroslaw K. Kapuscinski; Daniel F. Schmidt; Zeyu Zhou; Guoqi Q. Qian; Justin Zobel; et al. (EMBC, 2012)

GWISFI: A universal GPU interface for exhaustive search of pairwise interactions in case-control GWAS in minutes. - Qiao Wang; Fan Shi; Andrew Kowalczyk; Richard M. Campbell; Benjamin Goudey; Dave Rawlinson 001; Aaron Harwood; Herman L. Ferrá; Adam Kowalczyk (BIBM, 2014)

High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies. - Benjamin Goudey; Mani Abedini; John L. Hopper; Michael Inouye; Enes Makalic; Daniel F. Schmidt; John Wagner; Zeyu Zhou; Justin Zobel; Matthias Reumann (Health Inf. Sci. Syst., 2015)

Information theoretic alignment free variant calling. - Justin Bedo; Benjamin Goudey; Jeremy Wazny; Ze-yu Zhou (PeerJ Prepr., 2016)

A framework for optimal health worker allocation in under-resourced regions. - Benjamin Goudey; Roslyn I. Hickson; C. K. H. Hettiarachchige; M. Pore; C. Reeves; O. J. Smith; Annalisa Swan (IBM J. Res. Dev., 2017)

A hybrid approach for automated mutation annotation of the extended human mutation landscape in scientific literature. - Antonio Jimeno-Yepes; Andrew D. MacKinlay; Natalie Gunn; Christine Schieber; Noel Faux; Matthew Downton; Benjamin Goudey; Richard L. Martin (AMIA, 2018)

Predicting the Key Alzheimers Biomarkers in CSF from Plasma Analytes. - Christine Schieber; Annalisa Swan; Roslyn I. Hickson; Noel Faux; Benjamin Goudey (AMIA, 2018)

Exploring effective approaches for haplotype block phasing. - Ziad Al Bkhetan; Justin Zobel; Adam Kowalczyk; Karin Verspoor; Benjamin Goudey (BMC Bioinform., 2019)

eQTLHap: a tool for comprehensive eQTL analysis considering haplotypic and genotypic effects. - Ziad Al Bkhetan; Gursharan Chana; Cheng Soon Ong; Benjamin Goudey; Kotagiri Ramamohanarao (Briefings Bioinform., 2021)

Evaluation of consensus strategies for haplotype phasing. - Ziad Al Bkhetan; Gursharan Chana; Kotagiri Ramamohanarao; Karin Verspoor; Benjamin Goudey (Briefings Bioinform., 2021)

Propagation, detection and correction of errors using the sequence database network. - Benjamin Goudey; Nicholas Geard; Karin Verspoor; Justin Zobel (Briefings Bioinform., 2022)

Exploring automatic inconsistency detection for literature-based gene ontology annotation. - Jiyu Chen; Benjamin Goudey; Justin Zobel; Nicholas Geard; Karin Verspoor (Bioinform., 2022)

Disease progression modelling of Alzheimer's disease using probabilistic principal components analysis. - Martin Saint-Jalmes; Victor Fedyashov; Daniel Beck; Timothy Baldwin; Noel G. Faux; Pierrick Bourgeat; Jurgen Fripp; Colin L. Masters; Benjamin Goudey (NeuroImage, 2023)

Integration of background knowledge for automatic detection of inconsistencies in gene ontology annotation. - Jiyu Chen; Benjamin Goudey; Nicholas Geard; Karin Verspoor (Bioinform., 2024)