A high-level 3D visualization API for Java and ImageJ. - Benjamin Schmid; Johannes E. Schindelin; Albert Cardona; Mark Longair; Martin Heisenberg (BMC Bioinform., 2010)

Computational tools for the segmentation and registration of confocal brain images of Drosophila melanogaster (Software Tools für die Segmentierung und Registrierung konfokaler Gehirnbilder von Drosophila melanogaster) - Benjamin Schmid (2010)

Real-time multi-view deconvolution. - Benjamin Schmid; Jan Huisken (Bioinform., 2015)

3Dscript.server: true server-side 3D animation of microscopy images using a natural language-based syntax. - Benjamin Schmid; Philipp Tripal; Zoltán Winter; Ralph Palmisano (Bioinform., 2021)