GPU Implementation of Pairwise Gaussian Mixture Models for Multi-Modal Gene Co-Expression Networks. - Benjamin T. Shealy; Josh J. R. Burns; Melissa C. Smith; F. Alex Feltus; Stephen P. Ficklin (IEEE Access, 2019)

Cellular State Transformations using Generative Adversarial Networks. - Colin Targonski; Benjamin T. Shealy; Melissa C. Smith; F. Alex Feltus (CoRR, 2019)

Cellular State Transformations Using Deep Learning for Precision Medicine Applications. - Colin Targonski; M. Reed Bender; Benjamin T. Shealy; Benafsh Husain; Bill Paseman; Melissa C. Smith; F. Alex Feltus (Patterns, 2020)

Intelligent Resource Provisioning for Scientific Workflows and HPC. - Benjamin T. Shealy; F. Alex Feltus; Melissa C. Smith (WORKS, 2021)

GPU Acceleration of the HemeLB Code for Lattice Boltzmann Simulations in Sparse Complex Geometries. - Benjamin T. Shealy; Mehrdad Yousefi; Ashwin Trikuta Srinath; Melissa C. Smith; Ulf D. Schiller (IEEE Access, 2021)

Addressing noise in co-expression network construction. - Josh J. R. Burns; Benjamin T. Shealy; Mitchell S. Greer; John A. Hadish; Matthew McGowan; Tyler Biggs; Melissa C. Smith; F. Alex Feltus; Stephen P. Ficklin (Briefings Bioinform., 2022)

GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure. - John A. Hadish; Tyler Biggs; Benjamin T. Shealy; M. Reed Bender; Coleman McKnight; Connor Wytko; Melissa C. Smith; F. Alex Feltus; Loren A. Honaas; Stephen P. Ficklin (BMC Bioinform., 2022)