Controversy in mechanistic modelling with Gaussian processes. - Benn Macdonald; Catherine F. Higham; Dirk Husmeier (ICML, 2015)

Computational Inference in Systems Biology. - Benn Macdonald; Dirk Husmeier (IWBBIO (2), 2015)

Closed-form formulas vs. PDE based numerical solution for the FRAP data processing: Theoretical and practical comparison. - Stepán Papácek; Benn Macdonald; Ctirad Matonoha (Comput. Math. Appl., 2017)

Statistical inference in mechanistic models: time warping for improved gradient matching. - Mu Niu; Benn Macdonald; Simon Rogers; Maurizio Filippone; Dirk Husmeier (Comput. Stat., 2018)

Model selection via marginal likelihood estimation by combining thermodynamic integration and gradient matching. - Benn Macdonald; Dirk Husmeier (Stat. Comput., 2019)