proFIA: a data preprocessing workflow for flow injection analysis coupled to high-resolution mass spectrometry. - Alexis Delabrière; Ulli M. Hohenester; Benoit Colsch; Christophe Junot; François Fenaille; Etienne A. Thévenot (Bioinform., 2017)

A strategy for multimodal data integration: application to biomarkers identification in spinocerebellar ataxia. - Imene Garali; Isaac M. Adanyeguh; Farid Ichou; Vincent Perlbarg; Alexandre Seyer; Benoit Colsch; Ivan Moszer; Vincent Guillemot; Alexandra Durr; Fanny Mochel; Arthur Tenenhaus (Briefings Bioinform., 2018)

MetaboRank: network-based recommendation system to interpret and enrich metabolomics results. - Clément Frainay; Sandrine Aros; Maxime Chazalviel; Thomas Garcia; Florence Vinson; Nicolas Weiss; Benoit Colsch; Frédéric Sedel; Dominique Thabut; Christophe Junot; Fabien Jourdan (Bioinform., 2019)

Non-Negative Matrix Factorization of SWATH DIA Data Improves Global Metabolite Identification. - Diana Karaki; Sylvain Dechaumet; Annelaure Damont; Benoit Colsch; François Fenaille; Antoine Souloumiac; Etienne A. Thévenot (EUSIPCO, 2024)

Multi-cohort machine learning identifies predictors of cognitive impairment in Parkinson's disease. - Rebecca Ting Jiin Loo; Lukas Pavelka; Graziella Mangone; Fouad Khoury; Marie Vidailhet; Jean-Christophe Corvol; Enrico Glaab; Geeta Acharya; Gloria Aguayo; Myriam Alexandre; Muhammad Ali; Wim Ammerlann; et al. (npj Digit. Medicine, 2025)