MRF Agent Based Segmentation: Application to MRI Brain Scans. - Benoit Scherrer; Michel Dojat; Florence Forbes; Catherine Garbay (AIME, 2007)

LOCUS: LOcal Cooperative Unified Segmentation of MRI Brain Scans. - Benoit Scherrer; Michel Dojat; Florence Forbes; Catherine Garbay (MICCAI (1), 2007)

Segmentation des tissus et structures sur les IRM cérébrales : agents markoviens locaux coopératifs et formulation bayésienne. (MR brain scan tissus and structures segmentation: local cooperative Markovian agents and Bayesian formulation). - Benoît Scherrer (2008)

A Conditional Random Field Approach for Coupling Local Registration with Robust Tissue and Structure Segmentation. - Benoit Scherrer; Florence Forbes; Michel Dojat (MICCAI (1), 2009)

Agentification of Markov model-based segmentation: Application to magnetic resonance brain scans. - Benoit Scherrer; Michel Dojat; Florence Forbes; Catherine Garbay (Artif. Intell. Medicine, 2009)

Distributed Local MRF Models for Tissue and Structure Brain Segmentation. - Benoit Scherrer; Florence Forbes; Catherine Garbay; Michel Dojat (IEEE Trans. Medical Imaging, 2009)

Why multiple b-values are required for multi-tensor models: evaluation with a constrained log-Euclidean model. - Benoit Scherrer; Simon K. Warfield (ISBI, 2010)

On the accuracy of unwarping techniques for the correction of susceptibility-induced geometric distortion in magnetic resonance Echo-planar images. - Ali Gholipour; Nasser Kehtarnavaz; Benoit Scherrer; Simon K. Warfield (EMBC, 2011)

Toward an accurate multi-fiber assessment strategy for clinical practice. - Benoit Scherrer; Simon K. Warfield (ISBI, 2011)

Super-Resolution in Diffusion-Weighted Imaging. - Benoit Scherrer; Ali Gholipour; Simon K. Warfield (MICCAI (2), 2011)

Incorporating anatomical connectivity into EEG source estimation via sparse approximation with cortical graph wavelets. - David K. Hammond; Benoit Scherrer; Allen D. Malony (ICASSP, 2012)

Whole brain group network analysis using network bias and variance parameters. - Alireza Akhondi Asl; Arne Hans; Benoit Scherrer; Jurriaan M. Peters; Simon K. Warfield (ISBI, 2012)

Retrospective local artefacts detection in diffusion-weighted images using the Random Sample Consensus (RANSAC) paradigm. - Benoit Scherrer; Simon K. Warfield (ISBI, 2012)

Interpolating multi-fiber models by Gaussian mixture simplification. - Maxime Taquet; Benoit Scherrer; Christopher Benjamin; Sanjay P. Prabhu; Benoît Macq; Simon K. Warfield (ISBI, 2012)

Registration and Analysis of White Matter Group Differences with a Multi-fiber Model. - Maxime Taquet; Benoit Scherrer; Olivier Commowick; Jurriaan M. Peters; Mustafa Sahin; Benoît Macq; Simon K. Warfield (MICCAI (3), 2012)

Super-resolution reconstruction of diffusion-weighted images from distortion compensated orthogonal anisotropic acquisitions. - Benoit Scherrer; Ali Gholipour; Simon K. Warfield (MMBIA, 2012)

Super-resolution reconstruction to increase the spatial resolution of diffusion weighted images from orthogonal anisotropic acquisitions. - Benoit Scherrer; Ali Gholipour; Simon K. Warfield (Medical Image Anal., 2012)

Reliable Selection of the Number of Fascicles in Diffusion Images by Estimation of the Generalization Error. - Benoit Scherrer; Maxime Taquet; Simon K. Warfield (IPMI, 2013)

Automatic delineation of white matter fascicles by localization based upon anatomical spatial relationships. - Benoit Scherrer; Ralph O. Suarez; Simon K. Warfield (ISBI, 2013)

Characterizing the DIstribution of Anisotropic MicrO-structural eNvironments with Diffusion-Weighted Imaging (DIAMOND). - Benoit Scherrer; Armin Schwartzman; Maxime Taquet; Sanjay P. Prabhu; Mustafa Sahin; Alireza Akhondi Asl; Simon K. Warfield (MICCAI (3), 2013)

Estimation of a Multi-fascicle Model from Single B-Value Data with a Population-Informed Prior. - Maxime Taquet; Benoit Scherrer; Nicolas Boumal; Benoît Macq; Simon K. Warfield (MICCAI (1), 2013)

Cortical Graph Smoothing: A Novel Method for Exploiting DWI-Derived Anatomical Brain Connectivity to Improve EEG Source Estimation. - David K. Hammond; Benoit Scherrer; Simon K. Warfield (IEEE Trans. Medical Imaging, 2013)

A Fully Bayesian Inference Framework for Population Studies of the Brain Microstructure. - Maxime Taquet; Benoît Scherrer; Jurriaan M. Peters; Sanjay P. Prabhu; Simon K. Warfield (MICCAI (1), 2014)

A Mathematical Framework for the Registration and Analysis of Multi-Fascicle Models for Population Studies of the Brain Microstructure. - Maxime Taquet; Benoit Scherrer; Olivier Commowick; Jurriaan M. Peters; Mustafa Sahin; Benoît Macq; Simon K. Warfield (IEEE Trans. Medical Imaging, 2014)

A Framework for the Analysis of Diffusion Compartment Imaging (DCI). - Maxime Taquet; Benoit Scherrer; Simon K. Warfield (Visualization and Processing of Higher Order Descriptors for Multi-Valued Data, 2015)

Accelerated High Spatial Resolution Diffusion-Weighted Imaging. - Benoit Scherrer; Onur Afacan; Maxime Taquet; Sanjay P. Prabhu; Ali Gholipour; Simon K. Warfield (IPMI, 2015)

Symmetric block-matching registration for the distortion correction of Echo-Planar images. - Renaud Hédouin; Olivier Commowick; Maxime Taquet; Elise Bannier; Benoit Scherrer; Simon K. Warfield; Christian Barillot (ISBI, 2015)

Multi-session complex averaging for high resolution high SNR 3T MR visualization of ex vivo hippocampus and insula. - Aymeric Stamm; Jolene Singh; Benoît Scherrer; Onur Afacan; Simon K. Warfield (Image Processing, 2015)

Improved fidelity of brain microstructure mapping from single-shell diffusion MRI. - Maxime Taquet; Benoit Scherrer; Nicolas Boumal; Jurriaan M. Peters; Benoît Macq; Simon K. Warfield (Medical Image Anal., 2015)

Motion-Robust Reconstruction Based on Simultaneous Multi-slice Registration for Diffusion-Weighted MRI of Moving Subjects. - Bahram Marami; Benoit Scherrer; Onur Afacan; Simon K. Warfield; Ali Gholipour (MICCAI (3), 2016)

Motion-Robust Diffusion-Weighted Brain MRI Reconstruction Through Slice-Level Registration-Based Motion Tracking. - Bahram Marami; Benoit Scherrer; Onur Afacan; Burak Erem; Simon K. Warfield; Ali Gholipour (IEEE Trans. Medical Imaging, 2016)

Decoupling Axial and Radial Tissue Heterogeneity in Diffusion Compartment Imaging. - Benoit Scherrer; Maxime Taquet; Armin Schwartzman; Etienne St-Onge; Gaëtan Rensonnet; Sanjay P. Prabhu; Simon K. Warfield (IPMI, 2017)

Investigating the maturation of microstructure and radial orientation in the preterm human cortex with diffusion MRI. - Zach Eaton-Rosen; Benoît Scherrer; Andrew Melbourne; Sébastien Ourselin; Jeffrey J. Neil; Simon K. Warfield (NeuroImage, 2017)

Temporal slice registration and robust diffusion-tensor reconstruction for improved fetal brain structural connectivity analysis. - Bahram Marami; Seyed Sadegh Mohseni Salehi; Onur Afacan; Benoit Scherrer; Caitlin K. Rollins; Edward Yang; Judy A. Estroff; Simon K. Warfield; Ali Gholipour (NeuroImage, 2017)

Block-Matching Distortion Correction of Echo-Planar Images With Opposite Phase Encoding Directions. - Renaud Hédouin; Olivier Commowick; Elise Bannier; Benoit Scherrer; Maxime Taquet; Simon K. Warfield; Christian Barillot (IEEE Trans. Medical Imaging, 2017)

Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations. - Gaëtan Rensonnet; Benoît Scherrer; Gabriel Girard; Aleksandar Jankovski; Simon K. Warfield; Benoît Macq; Jean-Philippe Thiran; Maxime Taquet (NeuroImage, 2019)

Histological validation of per-bundle water diffusion metrics within a region of fiber crossing following axonal degeneration. - Gilberto Rojas-Vite; Ricardo Coronado-Leija; Omar Narvaez-Delgado; Alonso Ramirez-Manzanares; José L. Marroquín; Ramsés Noguez-Imm; Marcos L. Aranda; Benoit Scherrer; Jorge Larriva-Sahd; Luis Concha (NeuroImage, 2019)

Cross-scanner and cross-protocol multi-shell diffusion MRI data harmonization: Algorithms and results. - Lipeng Ning; Elisenda Bonet-Carne; Francesco Grussu; Farshid Sepehrband; Enrico Kaden; Jelle Veraart; Stefano B. Blumberg; Can Son Khoo; Marco Palombo; Iasonas Kokkinos; Daniel C. Alexander; Jaume Coll-Font; et al. (NeuroImage, 2020)

Magic DIAMOND: Multi-fascicle diffusion compartment imaging with tensor distribution modeling and tensor-valued diffusion encoding. - Alexis Reymbaut; Alex Valcourt Caron; Guillaume Gilbert; Filip Szczepankiewicz; Markus Nilsson; Simon K. Warfield; Maxime Descoteaux; Benoit Scherrer (Medical Image Anal., 2021)