Partition-based optimization model for generative anatomy modeling language (POM-GAML). - Doga Demirel; Berk Cetinsaya; Tansel Halic; Sinan Kockara; Shahryar Ahmadi (BMC Bioinform., 2019)

Comparison Study of Deep Learning Models for Colorectal Lesions Classification. - Berk Cetinsaya; James Dials; Doga Demirel; Tansel Halic; Suvranu De; Mark Gromski; Douglas Rex (ICISDM, 2020)

A partition-based optimization model and its performance benchmark for Generative Anatomy Modeling Language. - Doga Demirel; Berk Cetinsaya; Tansel Halic; Sinan Kockara; Dirk Reiners; Shahryar Ahmadi; Venkata Sreekanth Arikatla (Comput. Biol. Medicine, 2020)

Using Direct Volume Rendering for Augmented Reality in Resource-constrained Platforms. - Berk Cetinsaya; Carsten Neumann; Dirk Reiners (VR Workshops, 2022)

Camera-based Adaptive Line Formation and Dynamic Leader-Following Optimization (CALF-DLFO) for Drone Swarms in Real-time Updated Digital Twins. - Berk Cetinsaya; Carsten Neumann; Gerd Bruder; Dirk Reiners; Carolina Cruz-Neira (CoDIT, 2024)

From PID to swarms: A decade of advancements in drone control and path planning - A systematic review (2013-2023). - Berk Cetinsaya; Dirk Reiners; Carolina Cruz-Neira (Swarm Evol. Comput., 2024)

Assessing the Effects of Drone Control Interfaces on Situational Awareness and Digital Twin Environment Updates. - Berk Cetinsaya; Carsten Neumann; Gerd Bruder; Dirk Reiners; Carolina Cruz-Neira (VR Workshops, 2025)