A Brave New World: Virtual Reality and Augmented Reality in Systems Biology. - Berk Turhan; Zeynep H. Gümüs (Frontiers Bioinform., 2022)

PhosNetVis: A web-based tool for fast kinase-substrate enrichment analysis and interactive 2D/3D network visualizations of phosphoproteomics data. - Osho Rawal; Berk Turhan; Irene Font Peradejordi; Shreya Chandrasekar; Selim Kalayci; Sacha Gnjatic; Jeffrey Johnson; Mehdi Bouhaddou; Zeynep H. Gümüs (Patterns, 2025)