Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset. - Xiang Yue; Bernal Jimenez Gutierrez; Huan Sun 001 (ACL, 2020)

Clinical Phrase Mining with Language Models. - Kaushik Mani; Xiang Yue; Bernal Jimenez Gutierrez; Yungui Huang; Simon M. Lin; Huan Sun 001 (BIBM, 2020)

Document Classification for COVID-19 Literature. - Bernal Jimenez Gutierrez; Jucheng Zeng; Dongdong Zhang; Ping Zhang 016; Yu Su 001 (EMNLP (Findings), 2020)

Document Classification for COVID-19 Literature. - Bernal Jiménez Gutiérrez; Juncheng Zeng; Dongdong Zhang; Ping Zhang 016; Yu Su 001 (CoRR, 2020)

Thinking about GPT-3 In-Context Learning for Biomedical IE? Think Again. - Bernal Jimenez Gutierrez; Nikolas McNeal; Clayton Washington; You Chen 001; Lang Li 001; Huan Sun 001; Yu Su 001 (EMNLP (Findings), 2022)

Aligning Instruction Tasks Unlocks Large Language Models as Zero-Shot Relation Extractors. - Kai Zhang 033; Bernal Jimenez Gutierrez; Yu Su 001 (ACL (Findings), 2023)

Biomedical Language Models are Robust to Sub-optimal Tokenization. - Bernal Jimenez Gutierrez; Huan Sun 001; Yu Su 001 (BioNLP@ACL, 2023)

Solving the Right Problem is Key for Translational NLP: A Case Study in UMLS Vocabulary Insertion. - Bernal Jimenez Gutierrez; Yuqing Mao; Vinh Nguyen; Kin Wah Fung; Yu Su 001; Olivier Bodenreider (EMNLP (Findings), 2023)

HippoRAG: Neurobiologically Inspired Long-Term Memory for Large Language Models. - Bernal Jimenez Gutierrez; Yiheng Shu; Yu Gu 016; Michihiro Yasunaga; Yu Su 001 (NeurIPS, 2024)

Attention in Large Language Models Yields Efficient Zero-Shot Re-Rankers. - Shijie Chen; Bernal Jimenez Gutierrez; Yu Su 001 (ICLR, 2025)

From RAG to Memory: Non-Parametric Continual Learning for Large Language Models. - Bernal Jiménez Gutiérrez; Yiheng Shu; Weijian Qi; Sizhe Zhou; Yu Su 001 (CoRR, 2025)

Mind2Web 2: Evaluating Agentic Search with Agent-as-a-Judge. - Boyu Gou; Zanming Huang; Yuting Ning; Yu Gu 016; Michael Lin; Weijian Qi; Andrei Kopanev; Botao Yu; Bernal Jiménez Gutiérrez; Yiheng Shu; Chan Hee Song; Jiaman Wu; et al. (CoRR, 2025)