F-Workbench: a database-driven environment for the analysis of transcription factors. - Martin Werber; Bernd Weisshaar (German Conference on Bioinformatics, 2001)

GABI-Kat SimpleSearch: A Flanking Sequence Tag (FST) Database for the Identification of T-DNA Insertion Mutants in Arabidopsis Thaliana. - Yong Li 011; Mario G. Rosso; Nicolai Strizhov; Prisca Viehoever; Bernd Weisshaar (Bioinform., 2003)

GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions. - Yong Li 011; Mario G. Rosso; Prisca Viehoever; Bernd Weisshaar (Nucleic Acids Res., 2007)

Trace2PS and FSA2PS: two software toolkits for converting trace and fsa files to PostScript format. - Justina Krawczyk; Alexander Goesmann; Ralf Nolte; Martin Werber; Bernd Weisshaar (Source Code Biol. Medicine, 2009)

GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database. - Nils Kleinbölting; Gunnar Huep; Andreas Kloetgen; Prisca Viehoever; Bernd Weisshaar (Nucleic Acids Res., 2012)

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) Open. - Juliane C. Dohm; André E. Minoche; Daniela Holtgräwe; Salvador Capella-Gutiérrez; Falk Zakrzewski; Hakim Tafer; Oliver Rupp; Thomas Rosleff Sörensen; Ralf Stracke; Richard Reinhardt; Alexander Goesmann; Thomas Kraft; et al. (Nat., 2014)

SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome. - Kai Bernd Stadermann; Bernd Weisshaar; Daniela Holtgräwe (BMC Bioinform., 2015)

ReadXplorer 2 - detailed read mapping analysis and visualization from one single source. - Rolf Hilker; Kai Bernd Stadermann; Oliver Schwengers; Evgeny Anisiforov; Sebastian Jaenicke; Bernd Weisshaar; Tobias Zimmermann; Alexander Goesmann (Bioinform., 2016)