MGAlignIt: a web service for the alignment of mRNA/EST and genomic sequences. - Bernett T. K. Lee; Tin Wee Tan; Shoba Ranganathan (Nucleic Acids Res., 2003)

DEDB: a database of Drosophila melanogaster exons in splicing graph form. - Bernett T. K. Lee; Tin Wee Tan; Shoba Ranganathan (BMC Bioinform., 2004)

Xpro: database of eukaryotic protein-encoding genes. - Vivek Gopalan; Tin Wee Tan; Bernett T. K. Lee; Shoba Ranganathan (Nucleic Acids Res., 2004)

SDPMOD: an automated comparative modeling server for small disulfide-bonded proteins. - Lesheng Kong; Bernett Teck Kwong Lee; Joo Chuan Tong; Tin Wee Tan; Shoba Ranganathan (Nucleic Acids Res., 2004)

MVC Architecture in Bioinformatics web applications and its Java implementation. - Durgaprasad Bollina; Bernett T. K. Lee; Shoba Ranganathan (iiWAS, 2005)

ASGS: an alternative splicing graph web service. - Durgaprasad Bollina; Bernett T. K. Lee; Tin Wee Tan; Shoba Ranganathan (Nucleic Acids Res., 2006)

Advancing AI Literacy in Medical Education: A Medical AI Competency Framework Development. - Chang Cai; Jamie Andrew Duell; Daisy Minghui Chen; Weng Kin Ho; Bernett Teck Kwong Lee; Fang Li; Siyuan Liu 003; Olivia Ng; Vidya Sudarshan; Shang-Ming Zhou; Gaoxia Zhu; Xiuyi Fan (AIED (5), 2025)

Cross-cellular analysis of chromatin accessibility markers H3K4me3 and DNase in the context of detecting cell-identity genes: An "all-or-nothing" approach. - Boon How Low; Kaushal Krishna Kaliskar; Stefano Perna; Bernett Lee (J. Bioinform. Comput. Biol., 2025)