A Machine Text-Inspired Machine Learning Approach for Identification of Transmembrane Helix Boundaries. - Betty Yee Man Cheng; Jaime G. Carbonell; Judith Klein-Seetharaman (ISMIS, 2005)

Combining N-grams and Alignment in G-protein Coupling Specificity Prediction. - Betty Yee Man Cheng; Jaime G. Carbonell (APBC, 2007)

Automatic Detection of HIV Drug Resistance-Associated Mutations. - Betty Yee Man Cheng; Jaime G. Carbonell (ICMLA, 2010)