Investigating the fermentation dynamics structure of recombinant yeast YPB-G. - Gülnur Birol; Inanç Birol; Betül Kirdar; Z. Ilsen Önsan (Comput. Chem. Eng., 2003)

Integrative investigation of metabolic and transcriptomic data. - Pinar Pir; Betül Kirdar; Andrew Hayes; Z. Ilsen Önsan; Kutlu Ö. Ülgen; Stephen G. Oliver (BMC Bioinform., 2006)

Effect of carbon source perturbations on transcriptional regulation of metabolic fluxes in Saccharomyces cerevisiae. - Tunahan Çakir; Betül Kirdar; Z. Ilsen Önsan; Kutlu Ö. Ülgen; Jens Nielsen (BMC Syst. Biol., 2007)

How yeast re-programmes its transcriptional profile in response to different nutrient impulses. - Duygu Dikicioglu; Muhammed Erkan Karabekmez; Bharat Rash; Pinar Pir; Betül Kirdar; Stephen G. Oliver (BMC Syst. Biol., 2011)

A system based network approach to ethanol tolerance in Saccharomyces cerevisiae. - Ceyda Kasavi; Serpil Eraslan; Kazim Yalçin Arga; Ebru Oner; Betül Kirdar (BMC Syst. Biol., 2014)

CLUSTERnGO: a user-defined modelling platform for two-stage clustering of time-series data. - Isik Baris Fidaner; Ayca Cankorur-Cetinkaya; Duygu Dikicioglu; Betül Kirdar; Ali Taylan Cemgil; Stephen G. Oliver (Bioinform., 2016)