Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments. - Pin-Hao Chi; Bin Pang 001; Dmitry Korkin; Chi-Ren Shyu (Bioinform., 2009)

An accurate classification of native and non-native protein-protein interactions using supervised and semi-supervised learning approaches. - Nan Zhao 002; Bin Pang 001; Chi-Ren Shyu; Dmitry Korkin (BIBM, 2010)

ProteinDBS v2.0: a web server for global and local protein structure search. - Chi-Ren Shyu; Bin Pang 001; Pin-Hao Chi; Nan Zhao 002; Dmitry Korkin; Dong Xu 002 (Nucleic Acids Res., 2010)

Fast protein binding site comparisons using visual words representation. - Bin Pang 001; Nan Zhao 002; Dmitry Korkin; Chi-Ren Shyu (Bioinform., 2012)

DOMMINO: a database of macromolecular interactions. - Xingyan Kuang; Jing Ginger Han; Nan Zhao 002; Bin Pang 001; Chi-Ren Shyu; Dmitry Korkin (Nucleic Acids Res., 2012)

PBSword: a web server for searching similar protein-protein binding sites. - Bin Pang 001; Xingyan Kuang; Nan Zhao 002; Dmitry Korkin; Chi-Ren Shyu (Nucleic Acids Res., 2012)

PBSalign: Sequence-independent local alignment of protein binding sites. - Bin Pang 001; David Schlessman; Xingyan Kuang; Nan Zhao 002; Daniel Shyu; Dmitry Korkin; Chi-Ren Shyu (BIBM, 2013)

Fast GPU Algorithm for Analyzing Effective Connectivity in Functional Brain Imaging. - Lawrence Wing-Chi Chan; Bin Pang 001; Chi-Ren Shyu; Tao Chan; Pek-Lan Khong (ICONS, 2013)

Genetic algorithm supported by graphical processing unit improves the exploration of effective connectivity in functional brain imaging. - Lawrence Wing-Chi Chan; Bin Pang 001; Chi-Ren Shyu; Tao Chan; Pek-Lan Khong (Frontiers Comput. Neurosci., 2015)

An Integrated Approach to Sequence-Independent Local Alignment of Protein Binding Sites. - Bin Pang 001; David Schlessman; Xingyan Kuang; Nan Zhao 002; Daniel Shyu; Dmitry Korkin; Chi-Ren Shyu (IEEE ACM Trans. Comput. Biol. Bioinform., 2015)