Exploring complex miRNA-mRNA interactions with Bayesian networks by splitting-averaging strategy. - Bing Liu 002; Jiuyong Li; Anna Tsykin; Lin Liu 003; Arti B. Gaur; Gregory J. Goodall (BMC Bioinform., 2009)

Discovery of functional miRNA-mRNA regulatory modules with computational methods. - Bing Liu 002; Jiuyong Li; Anna Tsykin (J. Biomed. Informatics, 2009)

Identifying functional miRNA-mRNA regulatory modules with correspondence latent dirichlet allocation. - Bing Liu 002; Lin Liu 003; Anna Tsykin; Gregory J. Goodall; Jeffrey E. Green; Min Zhu; Chang-Hee Kim; Jiuyong Li (Bioinform., 2010)

Inferring functional miRNA-mRNA regulatory modules in epithelial-mesenchymal transition with a probabilistic topic model. - Junpeng Zhang 001; Bing Liu 002; Jianfeng He 001; Lei Ma 010; Jiuyong Li (Comput. Biol. Medicine, 2012)

Inferring microRNA-mRNA causal regulatory relationships from expression data. - Thuc Duy Le; Lin Liu 003; Anna Tsykin; Gregory J. Goodall; Bing Liu 002; Bing-Yu Sun; Jiuyong Li (Bioinform., 2013)

Inferring microRNA and transcription factor regulatory networks in heterogeneous data. - Thuc Duy Le; Lin Liu 003; Bing Liu 002; Anna Tsykin; Gregory J. Goodall; Kenji Satou; Jiuyong Li (BMC Bioinform., 2013)

Identifying miRNAs, targets and functions. - Bing Liu 002; Jiuyong Li; Murray J. Cairns (Briefings Bioinform., 2014)

Inferring condition-specific miRNA activity from matched miRNA and mRNA expression data. - Junpeng Zhang 001; Thuc Duy Le; Lin Liu 003; Bing Liu 002; Jianfeng He 001; Gregory J. Goodall; Jiuyong Li (Bioinform., 2014)

Identifying direct miRNA-mRNA causal regulatory relationships in heterogeneous data. - Junpeng Zhang 001; Thuc Duy Le; Lin Liu 003; Bing Liu 002; Jianfeng He 001; Gregory J. Goodall; Jiuyong Li (J. Biomed. Informatics, 2014)

From miRNA regulation to miRNA-TF co-regulation: computational approaches and challenges. - Thuc Duy Le; Lin Liu 003; Junpeng Zhang 001; Bing Liu 002; Jiuyong Li (Briefings Bioinform., 2015)