DrugViz: a Cytoscape plugin for visualizing and analyzing small molecule drugs in biological networks. - Bing Xiong 003; Ke Liu; Jie Wu; David L. Burk; Hualiang Jiang; Jingkang Shen (Bioinform., 2008)

BSSF: a fingerprint based ultrafast binding site similarity search and function analysis server. - Bing Xiong 003; Jie Wu; David L. Burk; Mengzhu Xue; Hualiang Jiang; Jingkang Shen (BMC Bioinform., 2010)

Knowledge-Based Scoring Functions in Drug Design. 1. Developing a Target-Specific Method for Kinase-Ligand Interactions. - Mengzhu Xue; Mingyue Zheng; Bing Xiong 003; Yanlian Li; Hualiang Jiang; Jingkang Shen (J. Chem. Inf. Model., 2010)

Knowledge-Based Scoring Functions in Drug Design: 2. Can the Knowledge Base Be Enriched? - Qiancheng Shen; Bing Xiong 003; Mingyue Zheng; Xiaomin Luo; Cheng Luo; Xian Liu; Yun Du; Jing Li; Weiliang Zhu; Jingkang Shen; Hualiang Jiang (J. Chem. Inf. Model., 2011)

Knowledge-Based Scoring Functions in Drug Design: 3. A Two-Dimensional Knowledge-Based Hydrogen-Bonding Potential for the Prediction of Protein-Ligand Interactions. - Mingyue Zheng; Bing Xiong 003; Cheng Luo; Shanshan Li; Xian Liu; Qiancheng Shen; Jing Li; Weiliang Zhu; Xiaomin Luo; Hualiang Jiang (J. Chem. Inf. Model., 2011)

Water PMF for predicting the properties of water molecules in protein binding site. - Mingyue Zheng; Yanlian Li; Bing Xiong 003; Hualiang Jiang; Jingkang Shen (J. Comput. Chem., 2013)