BISON: bio-interface for the semi-global analysis of network patterns. - Christopher Besemann; Anne M. Denton; Nathan J. Carr; Birgit M. Prüß (Source Code Biol. Medicine, 2006)

Relating gene expression data on two-component systems to functional annotations in Escherichia coli. - Anne M. Denton; Jianfei Wu; Megan K. Townsend; Preeti Sule; Birgit M. Prüß (BMC Bioinform., 2008)

Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO). - Jolene Ramsey; Brenley K. McIntosh; Daniel P. Renfro; Suzanne A. Aleksander; Sandra A. LaBonte; Curtis Ross; Adrienne E. Zweifel; Nathan Liles; Shabnam Farrar; Jason J. Gill; Ivan Erill; Sarah Ades; et al. (PLoS Comput. Biol., 2021)