Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm. - Thomas Grotkjær; Ole Winther; Birgitte Regenberg; Jens Nielsen; Lars Kai Hansen (Bioinform., 2006)

Sensitive detection of circular DNAs at single-nucleotide resolution using guided realignment of partially aligned reads. - Iñigo Prada-Luengo; Anders Krogh; Lasse Maretty; Birgitte Regenberg (BMC Bioinform., 2019)

CReSIL: accurate identification of extrachromosomal circular DNA from long-read sequences. - Visanu Wanchai; Piroon Jenjaroenpun; Thongpan Leangapichart; Gerard Arrey; Charles M. Burnham; Maria C. Tümmler; Jesus Delgado-Calle; Birgitte Regenberg; Intawat Nookaew (Briefings Bioinform., 2022)