Efficient Skin Detection under Severe Illumination Changes and Shadows. - Bishesh Khanal; Desire Sidibé (ICIRA (2), 2011)

Robust Road Signs Segmentation in Color Images. - Bishesh Khanal; Sharib Ali; Desire Sidibé (VISAPP (1), 2012)

A Biophysical Model of Shape Changes due to Atrophy in the Brain with Alzheimer's Disease. - Bishesh Khanal; Marco Lorenzi; Nicholas Ayache; Xavier Pennec (MICCAI (2), 2014)

A biophysical model of brain deformation to simulate and analyze longitudinal MRIs of patients with Alzheimer's disease. - Bishesh Khanal; Marco Lorenzi; Nicholas Ayache; Xavier Pennec (NeuroImage, 2016)

3D Reconstruction in Canonical Co-ordinate Space from Arbitrarily Oriented 2D Images. - Benjamin Hou; Bishesh Khanal; Amir Alansary; Steven G. McDonagh 001; Alice Davidson; Mary A. Rutherford; Joseph V. Hajnal; Daniel Rueckert; Ben Glocker; Bernhard Kainz (CoRR, 2017)

Computing CNN Loss and Gradients for Pose Estimation with Riemannian Geometry. - Benjamin Hou; Nina Miolane; Bishesh Khanal; Matthew C. H. Lee; Amir Alansary; Steven McDonagh 001; Joseph V. Hajnal; Daniel Rueckert; Ben Glocker; Bernhard Kainz (MICCAI (1), 2018)

EchoFusion: Tracking and Reconstruction of Objects in 4D Freehand Ultrasound Imaging Without External Trackers. - Bishesh Khanal; Alberto Gómez 002; Nicolas Toussaint; Steven McDonagh 001; Veronika A. M. Zimmer; Emily Skelton; Jacqueline Matthew; Daniel Grzech; Robert Wright; Chandni Gupta; Benjamin Hou; Daniel Rueckert; et al. (DATRA/PIPPI@MICCAI, 2018)

Fast Multiple Landmark Localisation Using a Patch-Based Iterative Network. - Yuanwei Li; Amir Alansary; Juan J. Cerrolaza; Bishesh Khanal; Matthew Sinclair; Jacqueline Matthew; Chandni Gupta; Caroline L. Knight; Bernhard Kainz; Daniel Rueckert (MICCAI (1), 2018)

Standard Plane Detection in 3D Fetal Ultrasound Using an Iterative Transformation Network. - Yuanwei Li; Bishesh Khanal; Benjamin Hou; Amir Alansary; Juan J. Cerrolaza; Matthew Sinclair; Jacqueline Matthew; Chandni Gupta; Caroline L. Knight; Bernhard Kainz; Daniel Rueckert (MICCAI (1), 2018)

Weakly Supervised Localisation for Fetal Ultrasound Images. - Nicolas Toussaint; Bishesh Khanal; Matthew Sinclair; Alberto Gómez 002; Emily Skelton; Jacqueline Matthew; Julia A. Schnabel (DLMIA/ML-CDS@MICCAI, 2018)

LSTM Spatial Co-transformer Networks for Registration of 3D Fetal US and MR Brain Images. - Robert Wright; Bishesh Khanal; Alberto Gómez 002; Emily Skelton; Jacqueline Matthew; Joseph V. Hajnal; Daniel Rueckert; Julia A. Schnabel (DATRA/PIPPI@MICCAI, 2018)

Multi-view Image Reconstruction: Application to Fetal Ultrasound Compounding. - Veronika A. Zimmer; Alberto Gómez 002; Yohan Noh; Nicolas Toussaint; Bishesh Khanal; Robert Wright; Laura Peralta Pereira; Milou P. M. van Poppel; Emily Skelton; Jacqueline Matthew; Julia A. Schnabel (DATRA/PIPPI@MICCAI, 2018)

Oversegmenting Graphs. - Alberto Gómez 002; Veronika A. Zimmer; Bishesh Khanal; Nicolas Toussaint; Julia A. Schnabel (CoRR, 2018)

3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images. - Benjamin Hou; Bishesh Khanal; Amir Alansary; Steven McDonagh 001; Alice Davidson; Mary A. Rutherford; Joseph V. Hajnal; Daniel Rueckert; Ben Glocker; Bernhard Kainz (IEEE Trans. Medical Imaging, 2018)

Controlling Meshes via Curvature: Spin Transformations for Pose-Invariant Shape Processing. - Loïc Le Folgoc; Daniel Coelho de Castro; Jeremy Tan; Bishesh Khanal; Konstantinos Kamnitsas; Ian Walker; Amir Alansary; Ben Glocker (IPMI, 2019)

Confident Head Circumference Measurement from Ultrasound with Real-Time Feedback for Sonographers. - Samuel Budd; Matthew Sinclair; Bishesh Khanal; Jacqueline Matthew; David Lloyd 003; Alberto Gómez 002; Nicolas Toussaint; Emma C. Robinson; Bernhard Kainz (MICCAI (4), 2019)

Image Reconstruction in a Manifold of Image Patches: Application to Whole-Fetus Ultrasound Imaging. - Alberto Gómez 002; Veronika A. Zimmer; Nicolas Toussaint; Robert Wright; James R. Clough; Bishesh Khanal; Milou P. M. van Poppel; Emily Skelton; Jackie Matthews; Julia A. Schnabel (MLMIR@MICCAI, 2019)

Automatic Cobb Angle Detection Using Vertebra Detector and Vertebra Corners Regression. - Bidur Khanal; Lavsen Dahal; Prashant Adhikari; Bishesh Khanal (CSI@MICCAI, 2019)

Complete Fetal Head Compounding from Multi-view 3D Ultrasound. - Robert Wright; Nicolas Toussaint; Alberto Gómez 002; Veronika A. M. Zimmer; Bishesh Khanal; Jacqueline Matthew; Emily Skelton; Bernhard Kainz; Daniel Rueckert; Joseph V. Hajnal; Julia A. Schnabel (MICCAI (3), 2019)

Towards Whole Placenta Segmentation at Late Gestation Using Multi-view Ultrasound Images. - Veronika A. Zimmer; Alberto Gómez 002; Emily Skelton; Nicolas Toussaint; Tong Zhang 017; Bishesh Khanal; Robert Wright; Yohan Noh; Alison Ho; Jacqueline Matthew; Joseph V. Hajnal; Julia A. Schnabel (MICCAI (5), 2019)

Ensemble U-Net Model for Efficient Polyp Segmentation. - Shruti Shrestha; Bishesh Khanal; Sharib Ali (MediaEval, 2020)

Uncertainty Estimation in Deep 2D Echocardiography Segmentation. - Lavsen Dahal; Aayush Kafle; Bishesh Khanal (CoRR, 2020)

Label Geometry Aware Discriminator for Conditional Generative Networks. - Suman Sapkota; Bidur Khanal; Binod Bhattarai; Bishesh Khanal; Tae-Kyun Kim 001 (CoRR, 2021)

Evaluation and comparison of accurate automated spinal curvature estimation algorithms with spinal anterior-posterior X-Ray images: The AASCE2019 challenge. - Liansheng Wang; Cong Xie; Yi Lin; Hong-Yu Zhou; Kailin Chen; Dalong Cheng; Florian Dubost; Benjamin Collery; Bidur Khanal; Bishesh Khanal; Rong Tao; Shangliang Xu; et al. (Medical Image Anal., 2021)

COVID-19-related Nepali Tweets Classification in a Low Resource Setting. - Rabin Adhikari; Safal Thapaliya; Nirajan Basnet; Samip Poudel; Aman Shakya; Bishesh Khanal (SMM4H@COLING, 2022)

Label Geometry Aware Discriminator for Conditional Generative Adversarial Networks. - Suman Sapkota; Bidur Khanal; Binod Bhattarai; Bishesh Khanal; Tae-Kyun Kim 001 (ICPR, 2022)

FixMatchSeg: Fixing FixMatch for Semi-Supervised Semantic Segmentation. - Pratima Upretee; Bishesh Khanal (CoRR, 2022)

Synthetic Boost: Leveraging Synthetic Data for Enhanced Vision-Language Segmentation in Echocardiography. - Rabin Adhikari; Manish Dhakal; Safal Thapaliya; Kanchan Poudel; Prasiddha Bhandari; Bishesh Khanal (ASMUS@MICCAI, 2023)

Improving Medical Image Classification in Noisy Labels Using only Self-supervised Pretraining. - Bidur Khanal; Binod Bhattarai; Bishesh Khanal; Cristian A. Linte (DEMI@MICCAI, 2023)

Investigating the impact of class-dependent label noise in medical image classification. - Bidur Khanal; S. M. Kamrul Hasan; Bishesh Khanal; Cristian A. Linte (Image Processing, 2023)

M-VAAL: Multimodal Variational Adversarial Active Learning for Downstream Medical Image Analysis Tasks. - Bidur Khanal; Binod Bhattarai; Bishesh Khanal; Danail Stoyanov; Cristian A. Linte (MIUA, 2023)

Benchmarking Encoder-Decoder Architectures for Biplanar X-ray to 3D Bone Shape Reconstruction. - Mahesh Shakya; Bishesh Khanal (NeurIPS, 2023)

Deep-learning assisted detection and quantification of (oo)cysts of Giardia and Cryptosporidium on smartphone microscopy images. - Suprim Nakarmi; Sanam Pudasaini; Safal Thapaliya; Pratima Upretee; Retina Shrestha; Basant Giri; Bhanu Bhakta Neupane; Bishesh Khanal (CoRR, 2023)

FUTURE-AI: International consensus guideline for trustworthy and deployable artificial intelligence in healthcare. - Karim Lekadir; Aasa Feragen; Abdul Joseph Fofanah; Alejandro F. Frangi; Alena Buyx; Anais Emelie; Andrea Lara; Antonio R. Porras; An-Wen Chan; Arcadi Navarro; Ben Glocker; Benard Ohene Botwe; et al. (CoRR, 2023)

Benchmarking Encoder-Decoder Architectures for Biplanar X-ray to 3D Shape Reconstruction. - Mahesh Shakya; Bishesh Khanal (CoRR, 2023)

Fast fetal head compounding from multi-view 3D ultrasound. - Robert Wright; Alberto Gómez 002; Veronika A. Zimmer; Nicolas Toussaint; Bishesh Khanal; Jacqueline Matthew; Emily Skelton; Bernhard Kainz; Daniel Rueckert; Joseph V. Hajnal; Julia A. Schnabel (Medical Image Anal., 2023)

TuneVLSeg: Prompt Tuning Benchmark for Vision-Language Segmentation Models. - Rabin Adhikari; Safal Thapaliya; Manish Dhakal; Bishesh Khanal (ACCV (3), 2024)

Investigating the Robustness of Vision Transformers against Label Noise in Medical Image Classification. - Bidur Khanal; Prashant Shrestha; Sanskar Amgain; Bishesh Khanal; Binod Bhattarai; Cristian A. Linte (EMBC, 2024)

VLSM-Adapter: Finetuning Vision-Language Segmentation Efficiently with Lightweight Blocks. - Manish Dhakal; Rabin Adhikari; Safal Thapaliya; Bishesh Khanal (MICCAI (9), 2024)

Exploring Transfer Learning in Medical Image Segmentation using Vision-Language Models. - Kanchan Poudel; Manish Dhakal; Prasiddha Bhandari; Rabin Adhikari; Safal Thapaliya; Bishesh Khanal (MIDL, 2024)

How does self-supervised pretraining improve robustness against noisy labels across various medical image classification datasets? - Bidur Khanal; Binod Bhattarai; Bishesh Khanal; Cristian A. Linte (CoRR, 2024)

AI-Assisted Cervical Cancer Screening. - Kanchan Poudel; Lisasha Poudel; Prabin Raj Shakya; Atit Poudel; Archana Shrestha; Bishesh Khanal (CoRR, 2024)

Parameter-efficient Fine-tuning for improved Convolutional Baseline for Brain Tumor Segmentation in Sub-Saharan Africa Adult Glioma Dataset. - Bijay Adhikari; Pratibha Kulung; Jakesh Bohaju; Laxmi Poudel; Raymond Confidence; Dong Zhang 009; Udunna C. Anazodo; Bishesh Khanal; Mahesh Shakya (CoRR, 2024)

NLPineers@ NLU of Devanagari Script Languages 2025: Hate Speech Detection using Ensembling of BERT-based models. - Anmol Guragain; Nadika Poudel; Rajesh Piryani; Bishesh Khanal (COLING Workshops, 2025)

Transforming healthcare through just, equitable and quality driven artificial intelligence solutions in South Asia. - Sushmita Adhikari; Iftikhar Ahmed; Deepak Bajracharya; Bishesh Khanal; Chandrasegarar Solomon; Kapila Jayaratne; Khondaker Abdullah Al Mamum; Muhammad Shamim Hayder Talukder; Sunila Shakya; Suresh Manandhar; Zahid Ali Memon; Moinul Haque Chowdhury; et al. (npj Digit. Medicine, 2025)

Author Correction: Transforming healthcare through just, equitable and quality driven artificial intelligence solutions in South Asia. - Sushmita Adhikari; Iftikhar Ahmed; Deepak Bajracharya; Bishesh Khanal; Chandrasegarar Solomon; Kapila Jayaratne; Khondaker Abdullah Al Mamum; Muhammad Shamim Hayder Talukder; Sunila Shakya; Suresh Manandhar; Zahid Ali Memon; Moinul Haque Chowdhury; et al. (npj Digit. Medicine, 2025)

Multimodal Lead-Specific Modeling of ECG for Low-Cost Pulmonary Hypertension Assessment. - Md. Naimul Islam Suvon; Shuo Zhou; Prasun C. Tripathi; Wenrui Fan; Samer Alabed; Bishesh Khanal; Venet Osmani; Andrew J. Swift; Chen Chen 042; Haiping Lu (CoRR, 2025)