Statistical estimation of T1 relaxation times using conventional magnetic resonance imaging. - Amanda F. Mejia; Elizabeth M. Sweeney; Blake Dewey; Govind Nair; Pascal Sati; Colin Shea; Daniel S. Reich; Russell T. Shinohara (NeuroImage, 2016)

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.12.0-rc1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher Burns 002; Erik Ziegler; Basile Pinsard; Cindee M. Madison; Michael L. Waskom; David Gage Ellis; Dav Clark; Michael Dayan; Alexandre Manhães-Savio; Michael Philipp Notter; et al. (Zenodo, 2016)

Efficient multi-atlas registration using an intermediate template image. - Blake E. Dewey; Aaron Carass; Ari M. Blitz; Jerry L. Prince (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2017)

Whole Brain Parcellation with Pathology: Validation on Ventriculomegaly Patients. - Aaron Carass; Muhan Shao; Xiang Li 063; Blake Dewey; Ari Blitz; Snehashis Roy; Dzung L. Pham; Jerry L. Prince; Lotta Maria Ellingsen (Patch-MI@MICCAI, 2017)

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.13.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher Burns 002; Erik Ziegler; Basile Pinsard; Cindee M. Madison; Michael L. Waskom; David Gage Ellis; Dav Clark; Jason Wong; Michael Dayan; Alexandre Manhães-Savio; et al. (Zenodo, 2017)

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.13.1. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Christopher J. Markiewicz; et al. (Zenodo, 2017)

nipy/nipype: 0.14.0-rc1. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Christopher J. Markiewicz; et al. (Zenodo, 2017)

nipy/nipype: 0.14.0-rc1. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Christopher J. Markiewicz; et al. (Zenodo, 2017)

nipy/nipype: 0.14.0. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher J. Markiewicz; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; et al. (Zenodo, 2017)

Self super-resolution for magnetic resonance images using deep networks. - Can Zhao 001; Aaron Carass; Blake E. Dewey; Jerry L. Prince (ISBI, 2018)

Multi-atlas segmentation of the hydrocephalus brain using an adaptive ventricle atlas. - Muhan Shao; Aaron Carass; Xiang Li 063; Blake E. Dewey; Ari M. Blitz; Jerry L. Prince; Lotta Maria Ellingsen (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2018)

Deep Harmonization of Inconsistent MR Data for Consistent Volume Segmentation. - Blake E. Dewey; Can Zhao 001; Aaron Carass; Jiwon Oh; Peter A. Calabresi; Peter C. M. van Zijl; Jerry L. Prince (SASHIMI@MICCAI, 2018)

A Deep Learning Based Anti-aliasing Self Super-Resolution Algorithm for MRI. - Can Zhao 001; Aaron Carass; Blake E. Dewey; Jonghye Woo; Jiwon Oh; Peter A. Calabresi; Daniel S. Reich; Pascal Sati; Dzung L. Pham; Jerry L. Prince (MICCAI (1), 2018)

nipy/nipype: Nipype - v1.0.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; Michael Philipp Notter; Christopher Burns 002; David Gage Ellis; Hans J. Johnson; Alexandre Manhães-Savio; Carlo Hämäläinen; Dorota Jarecka; Benjamin Yvernault; Christopher J. Markiewicz; et al. (Zenodo, 2018)

nipy/nipype: 1.0.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Christopher J. Markiewicz; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.0.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; David Gage Ellis; Christopher J. Markiewicz; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: Nipype 1.0.3. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; Christopher J. Markiewicz; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.0.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.0.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: Nipype 1.1.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Hans J. Johnson; Dorota Jarecka; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Hans J. Johnson; Dorota Jarecka; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.3. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hamalainen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.5. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.6. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.7. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

Evaluating the impact of intensity normalization on MR image synthesis. - Jacob C. Reinhold; Blake E. Dewey; Aaron Carass; Jerry L. Prince (Image Processing, 2019)

nipy/nipype: 1.1.8. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.1.9. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.3. - Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.2.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0-rc1. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.4.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; David Gage Ellis; Benjamin Yvernault; Carlo Hämäläinen; Michael Philipp Notter; Taylor Salo; et al. (Zenodo, 2019)

A Disentangled Latent Space for Cross-Site MRI Harmonization. - Blake E. Dewey; Lianrui Zuo; Aaron Carass; Yufan He; Yihao Liu 003; Ellen M. Mowry; Scott D. Newsome; Jiwon Oh; Peter A. Calabresi; Jerry L. Prince (MICCAI (7), 2020)

Self Domain Adapted Network. - Yufan He; Aaron Carass; Lianrui Zuo; Blake E. Dewey; Jerry L. Prince (MICCAI (1), 2020)

Contrast Adaptive Tissue Classification by Alternating Segmentation and Synthesis. - Dzung L. Pham; Yi-Yu Chou; Blake E. Dewey; Daniel S. Reich; John A. Butman; Snehashis Roy (SASHIMI@MICCAI, 2020)

Synthesizing Realistic Brain MR Images with Noise Control. - Lianrui Zuo; Blake E. Dewey; Aaron Carass; Yufan He; Muhan Shao; Jacob C. Reinhold; Jerry L. Prince (SASHIMI@MICCAI, 2020)

nipy/nipype: 1.4.1. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.4.2. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.5.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

nipy/nipype: 1.5.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

Information-Based Disentangled Representation Learning for Unsupervised MR Harmonization. - Lianrui Zuo; Blake E. Dewey; Aaron Carass; Yihao Liu 003; Yufan He; Peter A. Calabresi; Jerry L. Prince (IPMI, 2021)

Joint Image and Label Self-super-Resolution. - Samuel W. Remedios; Shuo Han 001; Blake E. Dewey; Dzung L. Pham; Jerry L. Prince; Aaron Carass (SASHIMI@MICCAI, 2021)

Autoencoder based self-supervised test-time adaptation for medical image analysis. - Yufan He; Aaron Carass; Lianrui Zuo; Blake E. Dewey; Jerry L. Prince (Medical Image Anal., 2021)

Unsupervised MR harmonization by learning disentangled representations using information bottleneck theory. - Lianrui Zuo; Blake E. Dewey; Yihao Liu 003; Yufan He; Scott D. Newsome; Ellen M. Mowry; Susan M. Resnick; Jerry L. Prince; Aaron Carass (NeuroImage, 2021)

SMORE: A Self-Supervised Anti-Aliasing and Super-Resolution Algorithm for MRI Using Deep Learning. - Can Zhao 001; Blake E. Dewey; Dzung L. Pham; Peter A. Calabresi; Daniel S. Reich; Jerry L. Prince (IEEE Trans. Medical Imaging, 2021)

nipy/nipype: 1.7.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2021)

Multiple Sclerosis brain lesion segmentation with different architecture ensembles. - Pouria Tohidi; Samuel W. Remedios; Danielle L. Greenman; Muhan Shao; Shuo Han 001; Blake E. Dewey; Jacob C. Reinhold; Yi-Yu Chou; Dzung L. Pham; Jerry L. Prince; Aaron Carass (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2022)

Bi-directional Synthesis of Pre- and Post-contrast MRI via Guided Feature Disentanglement. - Yuan Xue 002; Blake E. Dewey; Lianrui Zuo; Shuo Han 001; Aaron Carass; Peiyu Duan; Samuel W. Remedios; Dzung L. Pham; Shiv Saidha; Peter A. Calabresi; Jerry L. Prince (SASHIMI@MICCAI, 2022)

HACA3: A Unified Approach for Multi-site MR Image Harmonization. - Lianrui Zuo; Yihao Liu 003; Yuan Xue 002; Blake E. Dewey; Murat Bilgel; Ellen M. Mowry; Scott D. Newsome; Peter A. Calabresi; Susan M. Resnick; Jerry L. Prince; Aaron Carass (CoRR, 2022)

nipy/nipype: 1.7.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.3. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

Self-Supervised Super-Resolution for Anisotropic MR Images with and Without Slice Gap. - Samuel W. Remedios; Shuo Han 001; Lianrui Zuo; Aaron Carass; Dzung L. Pham; Jerry L. Prince; Blake E. Dewey (SASHIMI@MICCAI, 2023)

Unsupervised quality assurance for brain MR image rigid registration using latent shape representation. - Yuan Xue 002; Lianrui Zuo; Samuel W. Remedios; Blake E. Dewey; Peiyu Duan; Yihao Liu 003; Rendong Zhang; Scott D. Newsome; Ellen M. Mowry; Aaron Carass; Jerry L. Prince (Image Processing, 2023)

A deep generative prior for high-resolution isotropic MR head slices. - Samuel W. Remedios; Blake E. Dewey; Aaron Carass; Dzung L. Pham; Jerry L. Prince (Image Processing, 2023)

A latent space for unsupervised MR image quality control via artifact assessment. - Lianrui Zuo; Yuan Xue 002; Blake E. Dewey; Yihao Liu 003; Jerry L. Prince; Aaron Carass (Image Processing, 2023)

AniRes2D: Anisotropic Residual-enhanced Diffusion for 2D MR Super-Resolution. - Zejun Wu; Samuel W. Remedios; Blake E. Dewey; Aaron Carass; Jerry L. Prince (CoRR, 2023)

HACA3: A unified approach for multi-site MR image harmonization. - Lianrui Zuo; Yihao Liu 003; Yuan Xue 002; Blake E. Dewey; Samuel W. Remedios; Savannah Hays; Murat Bilgel; Ellen M. Mowry; Scott D. Newsome; Peter A. Calabresi; Susan M. Resnick; Jerry L. Prince; et al. (Comput. Medical Imaging Graph., 2023)

nipy/nibabel: 5.2.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; et al. (Zenodo, 2023)

Towards an Accurate and Generalizable Multiple Sclerosis Lesion Segmentation Model Using Self-Ensembled Lesion Fusion. - Jinwei Zhang; Lianrui Zuo; Blake E. Dewey; Samuel W. Remedios; Dzung L. Pham; Aaron Carass; Jerry L. Prince (ISBI, 2024)

RATNUS: Rapid, Automatic Thalamic Nuclei Segmentation Using Multimodal MRI Inputs. - Anqi Feng; Zhangxing Bian; Blake E. Dewey; Alexa Gail Colinco; Jiachen Zhuo; Jerry L. Prince (LDTM/MMMI/ML4MHD/ML-CDS@MICCAI, 2024)

Beyond MR Image Harmonization: Resolution Matters Too. - Savannah Hays; Samuel W. Remedios; Lianrui Zuo; Ellen M. Mowry; Scott D. Newsome; Peter A. Calabresi; Aaron Carass; Blake E. Dewey; Jerry L. Prince (SASHIMI@MICCAI, 2024)

TS-SR3: Time-Strided Denoising Diffusion Probabilistic Model for MR Super-Resolution. - Zejun Wu; Samuel W. Remedios; Blake E. Dewey; Aaron Carass; Jerry L. Prince (MLMI@MICCAI (1), 2024)

Super-Resolution Multi-Contrast Unbiased Eye Atlases With Deep Probabilistic Refinement. - Ho Hin Lee; Adam M. Saunders; Michael E. Kim; Samuel W. Remedios; Yucheng Tang; Qi Yang 004; Xin Yu 010; Shunxing Bao; Chloe Cho; Louise A. Mawn; Tonia S. Rex; Kevin L. Schey; et al. (CoRR, 2024)

Scalable, reproducible, and cost-effective processing of large-scale medical imaging datasets. - Michael E. Kim; Karthik Ramadass; Chenyu Gao; Praitayini Kanakaraj; Nancy R. Newlin; Gaurav Rudravaram; Kurt G. Schilling; Blake E. Dewey; Derek B. Archer; Timothy J. Hohman; Zhiyuan Li 012; Shunxing Bao; et al. (CoRR, 2024)

Scalable quality control on processing of large diffusion-weighted and structural magnetic resonance imaging datasets. - Michael E. Kim; Chenyu Gao; Karthik Ramadass; Praitayini Kanakaraj; Nancy R. Newlin; Gaurav Rudravaram; Kurt G. Schilling; Blake E. Dewey; David A. Bennett; Sid OBryant; Robert C. Barber; Derek B. Archer; et al. (CoRR, 2024)

PARE: A framework for removal of confounding effects from any distance-based dimension reduction method. - Andrew A. Chen; Kelly Clark; Blake E. Dewey; Anna Duval; Nicole Pellegrini; Govind Nair; Youmna Jalkh; Samar Khalil; Jon Zurawski; Peter A. Calabresi; Daniel S. Reich; Rohit Bakshi; et al. (PLoS Comput. Biol., 2024)

nipy/nibabel: 5.2.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; et al. (Zenodo, 2024)

nipy/nibabel: 5.3.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Dimitri Papadopoulos Orfanos; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; et al. (Zenodo, 2024)

nipy/nibabel: 5.3.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Dimitri Papadopoulos Orfanos; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; et al. (Zenodo, 2024)

Cycle-Consistent Zero-Shot Through-Plane Super-Resolution for Anisotropic Head MRI. - Samuel W. Remedios; Shuwen Wei; Aaron Carass; Blake E. Dewey; Jerry L. Prince (IPMI (1), 2025)

ECLARE: Efficient cross-planar learning for anisotropic resolution enhancement. - Samuel W. Remedios; Shuwen Wei; Shuo Han 001; Jinwei Zhang; Aaron Carass; Kurt G. Schilling; Dzung L. Pham; Jerry L. Prince; Blake E. Dewey (CoRR, 2025)