ARDB - Antibiotic Resistance Genes Database. - Bo Liu 021; Mihai Pop (Nucleic Acids Res., 2009)

MetaPhyler: Taxonomic profiling for metagenomic sequences. - Bo Liu 021; Theodore Gibbons; Mohammadreza Ghodsi; Mihai Pop (BIBM, 2010)

Identifying Differentially Abundant Metabolic Pathways in Metagenomic Datasets. - Bo Liu 021; Mihai Pop (ISBRA, 2010)

DNACLUST: accurate and efficient clustering of phylogenetic marker genes. - Mohammadreza Ghodsi; Bo Liu 021; Mihai Pop (BMC Bioinform., 2011)

Workshop: Comparative assembly of metagenomic sequences. - Bo Liu 021; Mihai Pop (ICCABS, 2012)

Computational Metagenomics: Network, Classification and Assembly. - Bo Liu 021 (2012)

TIPP: taxonomic identification and phylogenetic profiling. - Nam-phuong Nguyen; Siavash Mirarab; Bo Liu 021; Mihai Pop; Tandy J. Warnow (Bioinform., 2014)