An efficient parallel solution for Caputo fractional reaction-diffusion equation. - Chunye Gong; Weimin Bao; Guojian Tang; Bo Yang 023; Jie Liu 002 (J. Supercomput., 2014)

OHTMA: an optimized heuristic topology-aware mapping algorithm on the Tianhe-3 exascale supercomputer prototype. - Yishui Li; Xinhai Chen; Jie Liu 002; Bo Yang 023; Chunye Gong; Xinbiao Gan; Shengguo Li; Han Xu 008 (Frontiers Inf. Technol. Electron. Eng., 2020)

VBSF: a new storage format for SIMD sparse matrix-vector multiplication on modern processors. - Yishui Li; Peizhen Xie; Xinhai Chen; Jie Liu 002; Bo Yang 023; Shengguo Li; Chunye Gong; Xinbiao Gan; Han Xu 008 (J. Supercomput., 2020)

An efficient image to column algorithm for convolutional neural networks. - Chunye Gong; Xinhai Chen; Shuling Lv; Jie Liu 002; Bo Yang 023; Qinglin Wang; Weimin Bao; Yufei Pang; Yang Sun (IJCNN, 2021)

The High Precision Real-Time Facial Landmark Detection Technique Based on ShufflenetV2. - Shuling Lv; Jie Liu 002; Chunye Gong; Bo Yang 023; Xinbiao Gan (NCTCS, 2021)

DeepAtomicCharge: a new graph convolutional network-based architecture for accurate prediction of atomic charges. - Jike Wang; Dong-Sheng Cao 001; Cunchen Tang; Lei Xu 035; Qiaojun He; Bo Yang 023; Xi Chen; Huiyong Sun; Tingjun Hou (Briefings Bioinform., 2021)

ASFP (Artificial Intelligence based Scoring Function Platform): a web server for the development of customized scoring functions. - Xujun Zhang; Chao Shen 008; Xueying Guo; Zhe Wang 041; Gaoqi Weng; Qing Ye; Gaoang Wang; Qiaojun He; Bo Yang 023; Dong-Sheng Cao 001; Tingjun Hou (J. Cheminformatics, 2021)

PROTAC-DB: an online database of PROTACs. - Gaoqi Weng; Chao Shen 008; Dong-Sheng Cao 001; Junbo Gao; Xiaowu Dong; Qiaojun He; Bo Yang 023; Dan Li 013; Jian Wu 001; Tingjun Hou (Nucleic Acids Res., 2021)

Multi-constraint molecular generation based on conditional transformer, knowledge distillation and reinforcement learning. - Jike Wang; Chang-Yu Hsieh; Mingyang Wang 004; Xiaorui Wang; Zhenxing Wu; Dejun Jiang 002; Benben Liao; Xujun Zhang; Bo Yang 023; Qiaojun He; Dongsheng Cao 001; Xi Chen; et al. (Nat. Mach. Intell., 2021)

TianheQueries: Ultra-Fast and Scalable Graph Queries on Tianhe Supercomputer. - Xinbiao Gan; Guang Wu; Cong Liu; Jiaqi Si; Xuguang Chen; Bo Yang 023; Tiejun Li (HPCC/DSS/SmartCity/DependSys, 2022)

STEGNN: Spatial-Temporal Embedding Graph Neural Networks for Road Network Forecasting. - Jiaqi Si; Xinbiao Gan; Tiaojie Xiao; Bo Yang 023; Dezun Dong; Zhengbin Pang (ICPADS, 2022)

Improving the Performance of Lattice Boltzmann Method with Pipelined Algorithm on A Heterogeneous Multi-zone Processor. - Qingyang Zhang; Lei Xu 035; Rongliang Chen; Lin Chen 028; Xinhai Chen; Qinglin Wang; Jie Liu 002; Bo Yang 023 (PDCAT, 2022)

Optimizing MPI Collectives on Shared Memory Multi-Cores. - Jintao Peng; Jianbin Fang; Jie Liu 002; Min Xie; Yi Dai; Bo Yang 023; Shengguo Li; Zheng Wang 001 (SC, 2023)

PROTAC-DB 2.0: an updated database of PROTACs. - Gaoqi Weng; Xuanyan Cai; Dong-Sheng Cao 001; Hongyan Du; Chao Shen 008; Yafeng Deng; Qiaojun He; Bo Yang 023; Dan Li 013; Tingjun Hou (Nucleic Acids Res., 2023)

MT-office: parallel password recovery program for office on domestic heterogeneous multi-core processor. - Yongtao Luo; Bo Yang 023; Jie Liu 002; Ruibo Wang; Jinmin Wen; Tiaojie Xiao; Xuguang Chen; Chunye Gong (CCF Trans. High Perform. Comput., 2023)

An efficient heterogeneous parallel algorithm of the 3D MOC for multizone heterogeneous systems. - Runhua Li; Jie Liu 002; Guangchun Zhang; Chunye Gong; Bo Yang 023; Yuechao Liang (Comput. Phys. Commun., 2023)

SuperCSR: A Space-Time-Efficient CSR Representation for Large-scale Graph Applications on Supercomputers. - Xinbiao Gan; Tiejun Li; Qiang Zhang 053; Bo Yang 023; Xinhai Chen; Jie Liu 002 (ICPP, 2024)

GNNRL-Smoothing: A Prior-Free Reinforcement Learning Model for Mesh Smoothing. - Zhichao Wang; Xinhai Chen; Chunye Gong; Bo Yang 023; Liang Deng; Yufei Sun; Yufei Pang; Jie Liu 002 (CoRR, 2024)

MST: Topology-Aware Message Aggregation for Exascale Graph Processing of Traversal-Centric Algorithms. - Xinbiao Gan; Tiejun Li; Feng Xiong; Bo Yang 023; Xinhai Chen; Chunye Gong; Shijie Li 002; Kai Lu 001; Qiao Li 001; Yiming Zhang 003 (ACM Trans. Archit. Code Optim., 2024)

GraphCom: Communication Hierarchy-aware Graph Engine for Distributed Model Training. - Xinbiao Gan; Tiejun Li; Liang Wu; Qiang Zhang 053; Lingyun Song; Bo Yang 023; Jie Liu 002; Kai Lu 001 (WWW, 2025)

GraphCSR: A Space and Time-Efficient Sparse Matrix Representation for Web-scale Graph Processing. - Xinbiao Gan; Tiejun Li; Qiang Zhang 053; Guang Wu; Bo Yang 023; Chunye Gong; Jie Liu 002; Kai Lu 001 (WWW, 2025)

FMCC-RT: a scalable and fine-grained all-reduce algorithm for large-scale SMP clusters. - Jintao Peng; Jie Liu 002; Jianbin Fang; Min Xie; Yi Dai; Zhiquan Lai; Bo Yang 023; Chunye Gong; Xinjun Mao; Guo Mao; Jie Ren 007 (Sci. China Inf. Sci., 2025)