Microscopic validation of whole mouse micro-metastatic tumor imaging agents using cryo-imaging and sliding organ image registration. - Yiqiao Liu; Bo Zhou 009; Mohammed Q. Qutaish; David L. Wilson (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2016)

Coronary calcium visualization using dual energy chest radiography with sliding organ registration. - Di Wen 001; Katelyn Nye; Bo Zhou 009; Robert Gilkeson; David L. Wilson (Image Processing, 2016)

Generation of Virtual Dual Energy Images from Standard Single-Shot Radiographs Using Multi-scale and Conditional Adversarial Network. - Bo Zhou 009; Xunyu Lin; Brendan L. Eck; Jun Hou; David L. Wilson (ACCV (1), 2018)

Feature Decomposition Based Saliency Detection in Electron Cryo-Tomograms. - Bo Zhou 009; Qiang Guo; Kaiwen Wang; Xiangrui Zeng; Xin Gao 001; Min Xu 009 (BIBM, 2018)

Model Compression for Faster Structural Separation of Macromolecules Captured by Cellular Electron Cryo-Tomography. - JiaLiang Guo; Bo Zhou 009; Xiangrui Zeng; Zachary Freyberg; Min Xu 009 (ICIAR, 2018)

Respond-CAM: Analyzing Deep Models for 3D Imaging Data by Visualizations. - Guannan Zhao; Bo Zhou 009; Kaiwen Wang; Rui Jiang 001; Min Xu 009 (MICCAI (1), 2018)

Visualization of coronary artery calcium in dual energy chest radiography using automatic rib suppression. - Bo Zhou 009; Yi Jiang; Di Wen 001; Robert C. Gilkeson; Jun Hou; David L. Wilson (Image Processing, 2018)

Enhanced coronary calcium visualization and detection from dual energy chest x-rays with sliding organ registration. - Di Wen 001; Katelyn Nye; Bo Zhou 009; Robert Gilkeson; Amit Gupta; Shiraz Ranim; Spencer Couturier; David L. Wilson (Comput. Medical Imaging Graph., 2018)

Feature Decomposition Based Saliency Detection in Electron Cryo-Tomograms. - Bo Zhou 009; Qiang Guo; Xiangrui Zeng; Min Xu 009 (CoRR, 2018)

A Weakly Supervised Adaptive DenseNet for Classifying Thoracic Diseases and Identifying Abnormalities. - Bo Zhou 009; Yuemeng Li; Jiangcong Wang (CoRR, 2018)

Open-set Recognition of Unseen Macromolecules in Cellular Electron Cryo-Tomograms by Soft Large Margin Centralized Cosine Loss. - Xuefeng Du; Xiangrui Zeng; Bo Zhou 009; Alex Singh; Min Xu 009 (BMVC, 2019)

Semi-supervised Macromolecule Structural Classification in Cellular Electron Cryo-Tomograms using 3D Autoencoding Classifier. - Siyuan Liu; Xuefeng Du; Rong Xi; Fuya Xu; Xiangrui Zeng; Bo Zhou 009; Min Xu 009 (BMVC, 2019)

Limited Angle Tomography Reconstruction: Synthetic Reconstruction via Unsupervised Sinogram Adaptation. - Bo Zhou 009; Xunyu Lin; Brendan L. Eck (IPMI, 2019)

CT Data Curation for Liver Patients: Phase Recognition in Dynamic Contrast-Enhanced CT. - Bo Zhou 009; Adam P. Harrison; Jiawen Yao; Chi-Tung Cheng; Jing Xiao 006; Chien-Hung Liao; Le Lu 001 (DART/MIL3ID@MICCAI, 2019)

A Progressively-Trained Scale-Invariant and Boundary-Aware Deep Neural Network for the Automatic 3D Segmentation of Lung Lesions. - Bo Zhou 009; Antong Chen; Randolph Crawford; Belma Dogdas; Gregory Goldmacher (WACV, 2019)

Automatic localization and identification of mitochondria in cellular electron cryo-tomography using faster-RCNN. - Ran Li; Xiangrui Zeng; Stephanie E. Sigmund; Ruogu Lin; Bo Zhou 009; Chang Liu 031; Kaiwen Wang; Rui Jiang 001; Zachary Freyberg; Hairong Lv; Min Xu 009 (BMC Bioinform., 2019)

DuDoRNet: Learning a Dual-Domain Recurrent Network for Fast MRI Reconstruction With Deep T1 Prior. - Bo Zhou 009; S. Kevin Zhou (CVPR, 2020)

A Deep Learning-Facilitated Radiomics Solution for the Prediction of Lung Lesion Shrinkage in Non-Small Cell Lung Cancer Trials. - Antong Chen; Jennifer Saouaf; Bo Zhou 009; Randolph Crawford; Jianda Yuan; Junshui Ma; Richard Baumgartner; Shubing Wang; Gregory Goldmacher (ISBI, 2020)

Simultaneous Denoising and Motion Estimation for Low-Dose Gated PET Using a Siamese Adversarial Network with Gate-to-Gate Consistency Learning. - Bo Zhou 009; Yu-Jung Tsai; Chi Liu 001 (MICCAI (7), 2020)

Limited View Tomographic Reconstruction Using a Deep Recurrent Framework with Residual Dense Spatial-Channel Attention Network and Sinogram Consistency. - Bo Zhou 009; S. Kevin Zhou; James S. Duncan; Chi Liu 001 (CoRR, 2020)

Few-shot learning for classification of novel macromolecular structures in cryo-electron tomograms. - Ran Li; Liangyong Yu; Bo Zhou 009; Xiangrui Zeng; Zhenyu Wang; Xiaoyan Yang; Jing Zhang 062; Xin Gao 001; Rui Jiang 001; Min Xu 009 (PLoS Comput. Biol., 2020)

GVUI: Graphic-Assisted Voice User Interface Based on Multi-modal Human-Machine Conversation. - Bo Zhou 009; Long Li (AHFE (17), 2021)

Anatomy-Constrained Contrastive Learning for Synthetic Segmentation Without Ground-Truth. - Bo Zhou 009; Chi Liu 001; James S. Duncan (MICCAI (1), 2021)

Synthesizing Multi-tracer PET Images for Alzheimer's Disease Patients Using a 3D Unified Anatomy-Aware Cyclic Adversarial Network. - Bo Zhou 009; Rui Wang; Ming-Kai Chen; Adam P. Mecca; Ryan S. O'Dell; Christopher H. van Dyck; Richard E. Carson; James S. Duncan; Chi Liu 001 (MICCAI (6), 2021)

Anatomy-guided multimodal registration by learning segmentation without ground truth: Application to intraprocedural CBCT/MR liver segmentation and registration. - Bo Zhou 009; Zachary Augenfeld; Julius Chapiro; S. Kevin Zhou; Chi Liu 001; James S. Duncan (Medical Image Anal., 2021)

MDPET: A Unified Motion Correction and Denoising Adversarial Network for Low-Dose Gated PET. - Bo Zhou 009; Yu-Jung Tsai; Xiongchao Chen; James S. Duncan; Chi Liu 001 (IEEE Trans. Medical Imaging, 2021)

Limited View Tomographic Reconstruction Using a Cascaded Residual Dense Spatial-Channel Attention Network With Projection Data Fidelity Layer. - Bo Zhou 009; S. Kevin Zhou; James S. Duncan; Chi Liu 001 (IEEE Trans. Medical Imaging, 2021)

Dual-Branch Squeeze-Fusion-Excitation Module for Cross-Modality Registration of Cardiac SPECT and CT. - Xiongchao Chen; Bo Zhou 009; Huidong Xie; Xueqi Guo; Jiazhen Zhang; Albert J. Sinusas; John A. Onofrey; Chi Liu 001 (MICCAI (6), 2022)

ContraReg: Contrastive Learning of Multi-modality Unsupervised Deformable Image Registration. - Neel Dey; Jo Schlemper; Seyed Sadegh Mohseni Salehi; Bo Zhou 009; Guido Gerig; Michal Sofka (MICCAI (6), 2022)

MCP-Net: Inter-frame Motion Correction with Patlak Regularization for Whole-body Dynamic PET. - Xueqi Guo; Bo Zhou 009; Xiongchao Chen; Chi Liu 001; Nicha C. Dvornek (MICCAI (4), 2022)

Structure Detection in Three-Dimensional Cellular Cryoelectron Tomograms by Reconstructing Two-Dimensional Annotated Tilt Series. - Xiangrui Zeng; Ziqian Lin; Mostofa Rafid Uddin; Bo Zhou 009; Chao Cheng; Jing Zhang 062; Zachary Freyberg; Min Xu 009 (J. Comput. Biol., 2022)

Unsupervised inter-frame motion correction for whole-body dynamic PET using convolutional long short-term memory in a convolutional neural network. - Xueqi Guo; Bo Zhou 009; David Pigg; Bruce Spottiswoode; Michael E. Casey; Chi Liu 001; Nicha C. Dvornek (Medical Image Anal., 2022)

DuDoDR-Net: Dual-domain data consistent recurrent network for simultaneous sparse view and metal artifact reduction in computed tomography. - Bo Zhou 009; Xiongchao Chen; S. Kevin Zhou; James S. Duncan; Chi Liu 001 (Medical Image Anal., 2022)

Dual-domain self-supervised learning for accelerated non-Cartesian MRI reconstruction. - Bo Zhou 009; Jo Schlemper; Neel Dey; Seyed Sadegh Mohseni Salehi; Kevin N. Sheth; Chi Liu 001; James S. Duncan; Michal Sofka (Medical Image Anal., 2022)

DuDoUFNet: Dual-Domain Under-to-Fully-Complete Progressive Restoration Network for Simultaneous Metal Artifact Reduction and Low-Dose CT Reconstruction. - Bo Zhou 009; Xiongchao Chen; Huidong Xie; S. Kevin Zhou; James S. Duncan; Chi Liu 001 (IEEE Trans. Medical Imaging, 2022)

CancerUniT: Towards a Single Unified Model for Effective Detection, Segmentation, and Diagnosis of Eight Major Cancers Using a Large Collection of CT Scans. - Jieneng Chen; Yingda Xia; Jiawen Yao; Ke Yan 006; Jianpeng Zhang; Le Lu 001; Fakai Wang; Bo Zhou 009; Mingyan Qiu; Qihang Yu; Mingze Yuan; Wei Fang 005; et al. (ICCV, 2023)

Fast-MC-PET: A Novel Deep Learning-Aided Motion Correction and Reconstruction Framework for Accelerated PET. - Bo Zhou 009; Yu-Jung Tsai; Jiazhen Zhang; Xueqi Guo; Huidong Xie; Xiongchao Chen; Tianshun Miao; Yihuan Lu; James S. Duncan; Chi Liu 001 (IPMI, 2023)

Meta-information-Aware Dual-path Transformer for Differential Diagnosis of Multi-type Pancreatic Lesions in Multi-phase CT. - Bo Zhou 009; Yingda Xia; Jiawen Yao; Le Lu 001; Jingren Zhou 001; Chi Liu 001; James S. Duncan; Ling Zhang 002 (IPMI, 2023)

Dual-Domain Iterative Network with Adaptive Data Consistency for Joint Denoising and Few-Angle Reconstruction of Low-Dose Cardiac SPECT. - Xiongchao Chen; Bo Zhou 009; Huidong Xie; Xueqi Guo; Qiong Liu; Albert J. Sinusas; Chi Liu 001 (MILLanD@MICCAI, 2023)

TAI-GAN: Temporally and Anatomically Informed GAN for Early-to-Late Frame Conversion in Dynamic Cardiac PET Motion Correction. - Xueqi Guo; Luyao Shi; Xiongchao Chen; Bo Zhou 009; Qiong Liu; Huidong Xie; Yi-Hwa Liu; Richard Palyo; Edward J. Miller; Albert J. Sinusas; Bruce Spottiswoode; Chi Liu 001; et al. (SASHIMI@MICCAI, 2023)

Transformer-Based Dual-Domain Network for Few-View Dedicated Cardiac SPECT Image Reconstructions. - Huidong Xie; Bo Zhou 009; Xiongchao Chen; Xueqi Guo; Stephanie Thorn; Yi-Hwa Liu; Ge Wang 001; Albert J. Sinusas; Chi Liu 001 (MICCAI (10), 2023)

Cross-Domain Iterative Network for Simultaneous Denoising, Limited-Angle Reconstruction, and Attenuation Correction of Cardiac SPECT. - Xiongchao Chen; Bo Zhou 009; Huidong Xie; Xueqi Guo; Qiong Liu; Albert J. Sinusas; Chi Liu 001 (MLMI@MICCAI (1), 2023)

DSFormer: A Dual-domain Self-supervised Transformer for Accelerated Multi-contrast MRI Reconstruction. - Bo Zhou 009; Neel Dey; Jo Schlemper; Seyed Sadegh Mohseni Salehi; Chi Liu 001; James S. Duncan; Michal Sofka (WACV, 2023)

Towards a Single Unified Model for Effective Detection, Segmentation, and Diagnosis of Eight Major Cancers Using a Large Collection of CT Scans. - Jieneng Chen; Yingda Xia; Jiawen Yao; Ke Yan 006; Jianpeng Zhang; Le Lu 001; Fakai Wang; Bo Zhou 009; Mingyan Qiu; Qihang Yu; Mingze Yuan; Wei Fang 005; et al. (CoRR, 2023)

FedFTN: Personalized Federated Learning with Deep Feature Transformation Network for Multi-institutional Low-count PET Denoising. - Bo Zhou 009; Huidong Xie; Qiong Liu; Xiongchao Chen; Xueqi Guo; Zhicheng Feng; S. Kevin Zhou; Biao Li; Axel Rominger; Kuangyu Shi; James S. Duncan; Chi Liu 001 (CoRR, 2023)

Cross-domain Iterative Network for Simultaneous Denoising, Limited-angle Reconstruction, and Attenuation Correction of Low-dose Cardiac SPECT. - Xiongchao Chen; Bo Zhou 009; Huidong Xie; Xueqi Guo; Qiong Liu; Albert J. Sinusas; Chi Liu 001 (CoRR, 2023)

Joint Denoising and Few-angle Reconstruction for Low-dose Cardiac SPECT Using a Dual-domain Iterative Network with Adaptive Data Consistency. - Xiongchao Chen; Bo Zhou 009; Huidong Xie; Xueqi Guo; Qiong Liu; Albert J. Sinusas; Chi Liu 001 (CoRR, 2023)

Segmentation-Free PVC for Cardiac SPECT Using a Densely-Connected Multi-Dimensional Dynamic Network. - Huidong Xie; Zhao Liu; Luyao Shi; Kathleen Greco; Xiongchao Chen; Bo Zhou 009; Attila Feher; John C. Stendahl; Nabil Boutagy; Tassos C. Kyriakides; Ge Wang 001; Albert J. Sinusas; et al. (IEEE Trans. Medical Imaging, 2023)

DuSFE: Dual-Channel Squeeze-Fusion-Excitation co-attention for cross-modality registration of cardiac SPECT and CT. - Xiongchao Chen; Bo Zhou 009; Huidong Xie; Xueqi Guo; Jiazhen Zhang; James S. Duncan; Edward J. Miller; Albert J. Sinusas; John A. Onofrey; Chi Liu 001 (Medical Image Anal., 2023)

FedFTN: Personalized federated learning with deep feature transformation network for multi-institutional low-count PET denoising. - Bo Zhou 009; Huidong Xie; Qiong Liu; Xiongchao Chen; Xueqi Guo; Zhicheng Feng; Jun Hou; S. Kevin Zhou; Biao Li; Axel Rominger; Kuangyu Shi; James S. Duncan; et al. (Medical Image Anal., 2023)

MCP-Net: Introducing Patlak Loss Optimization to Whole-Body Dynamic PET Inter-Frame Motion Correction. - Xueqi Guo; Bo Zhou 009; Xiongchao Chen; Ming-Kai Chen; Chi Liu 001; Nicha C. Dvornek (IEEE Trans. Medical Imaging, 2023)

PDM: A Plug-and-Play Perturbed Multi-path Diffusion Module for Simultaneous Medical Image Segmentation Improvement and Uncertainty Estimation. - Bo Zhou 009; Tianqi Chen; Jun Hou; Yinchi Zhou; Huidong Xie; Chi Liu 001; James S. Duncan (MLMI@MICCAI (1), 2024)

Dual-Domain Coarse-to-Fine Progressive Estimation Network for Simultaneous Denoising, Limited-View Reconstruction, and Attenuation Correction of Cardiac SPECT. - Xiongchao Chen; Bo Zhou 009; Xueqi Guo; Huidong Xie; Qiong Liu; James S. Duncan; Albert J. Sinusas; Chi Liu 001 (CoRR, 2024)

POUR-Net: A Population-Prior-Aided Over-Under-Representation Network for Low-Count PET Attenuation Map Generation. - Bo Zhou 009; Jun Hou; Tianqi Chen; Yinchi Zhou; Xiongchao Chen; Huidong Xie; Qiong Liu; Xueqi Guo; Yu-Jung Tsai; Vladimir Y. Panin; Takuya Toyonaga; James S. Duncan; et al. (CoRR, 2024)

2.5D Multi-view Averaging Diffusion Model for 3D Medical Image Translation: Application to Low-count PET Reconstruction with CT-less Attenuation Correction. - Tianqi Chen; Jun Hou; Yinchi Zhou; Huidong Xie; Xiongchao Chen; Qiong Liu; Xueqi Guo; Menghua Xia; James S. Duncan; Chi Liu 001; Bo Zhou 009 (CoRR, 2024)

TAI-GAN: A Temporally and Anatomically Informed Generative Adversarial Network for early-to-late frame conversion in dynamic cardiac PET inter-frame motion correction. - Xueqi Guo; Luyao Shi; Xiongchao Chen; Qiong Liu; Bo Zhou 009; Huidong Xie; Yi-Hwa Liu; Richard Palyo; Edward J. Miller; Albert J. Sinusas; Lawrence H. Staib; Bruce Spottiswoode; et al. (Medical Image Anal., 2024)

Population-based deep image prior for dynamic PET denoising: A data-driven approach to improve parametric quantification. - Qiong Liu; Yu-Jung Tsai; Jean-Dominique Gallezot; Xueqi Guo; Ming-Kai Chen; Darko Pucar; Colin Young; Vladimir Y. Panin; Michael E. Casey; Tianshun Miao; Huidong Xie; Xiongchao Chen; et al. (Medical Image Anal., 2024)

Cascaded Multi-path Shortcut Diffusion Model for Medical Image Translation. - Yinchi Zhou; Tianqi Chen; Jun Hou; Huidong Xie; Nicha C. Dvornek; S. Kevin Zhou; David L. Wilson; James S. Duncan; Chi Liu 001; Bo Zhou 009 (Medical Image Anal., 2024)

DuDoCFNet: Dual-Domain Coarse-to-Fine Progressive Network for Simultaneous Denoising, Limited-View Reconstruction, and Attenuation Correction of Cardiac SPECT. - Xiongchao Chen; Bo Zhou 009; Xueqi Guo; Huidong Xie; Qiong Liu; James S. Duncan; Albert J. Sinusas; Chi Liu 001 (IEEE Trans. Medical Imaging, 2024)

A generalizable diffusion framework for 3D low-dose and few-view cardiac SPECT imaging. - Huidong Xie; Weijie Gan; Wei Ji; Xiongchao Chen; Alaa Alashi; Stephanie Thorn; Bo Zhou 009; Qiong Liu; Menghua Xia; Xueqi Guo; Yi-Hwa Liu; Hongyu An; et al. (Medical Image Anal., 2025)

Noise-aware dynamic image denoising and positron range correction for Rubidium-82 cardiac PET imaging via self-supervision. - Huidong Xie; Liang Guo; Alexandre Velo; Zhao Liu; Qiong Liu; Xueqi Guo; Bo Zhou 009; Xiongchao Chen; Yu-Jung Tsai; Tianshun Miao; Menghua Xia; Yi-Hwa Liu; et al. (Medical Image Anal., 2025)

Fed-NDIF: A Noise-Embedded Federated Diffusion Model For Low-Count Whole-Body PET Denoising. - Yinchi Zhou; Huidong Xie; Menghua Xia; Qiong Liu; Bo Zhou 009; Tianqi Chen; Jun Hou; Liang Guo; Xinyuan Zheng; Hanzhong Wang; Biao Li; Axel Rominger; et al. (CoRR, 2025)

POUR-Net: A Population-Prior-Aided Over-Under-Representation Network for Low-Count PET Attenuation Map Generation. - Bo Zhou 009; Jun Hou; Tianqi Chen; Yinchi Zhou; Xiongchao Chen; Huidong Xie; Qiong Liu; Xueqi Guo; Menghua Xia; Yu-Jung Tsai; Vladimir Y. Panin; Takuya Toyonaga; et al. (IEEE Trans. Medical Imaging, 2025)