Energy minimization and molecular dynamics studies of Asn-102 elastase. - Bogdan Lesyng; Edgar F. Meyer (J. Comput. Aided Mol. Des., 1987)

Quantum-classical Molecular Dynamics and Its Computer Implementation. - Piotr Bala; Palo Grochowski; Bogdan Lesyng; James Andrew McCammon (Comput. Chem., 1995)

Applicability of Commonly Used Atom-atom Type Potential Energy Functions in Structural Analysis of Nucleic Acids. the Role of Electrostatic Interactions. - Witold R. Rudnicki; Bogdan Lesyng (Comput. Chem., 1995)

Parallel Version of a Quantum Classical Molecular Dynamics Code for Complex Molecular and Biomolecular Systems. - Piotr Bala; Terry W. Clark; Pawel Grochowski; Bogdan Lesyng; James Andrew McCammon (PVM/MPI, 1997)

Advanced Calculations and Visualization of Enzymatic Reactions with the Combined Quantum Classical Molecular Dynamics Code. - Piotr Bala; Pawel Grochowski; Krzysztof Nowinski; Terry W. Clark; Bogdan Lesyng; James Andrew McCammon (PARA, 1998)

Prediction of pKas of Titratable Residues in Proteins Using a Poisson-Boltzmann Model of the Solute-Solvent System. - Jan Antosiewicz; Elzbieta Blachut-Okrasinska; Tomasz Grycuk; James M. Briggs; Stanislaw T. Wlodek; Bogdan Lesyng; James Andrew McCammon (Computational Molecular Dynamics, 1999)

Adding numbers with DNA. - Piotr Wasiewicz; Jan J. Mulawka; Witold R. Rudnicki; Bogdan Lesyng (SMC, 2000)

EUROGRID–European computational grid testbed. - Bogdan Lesyng; Piotr Bala; Dietmar W. Erwin (J. Parallel Distributed Comput., 2003)

β-spectrin consensus sequence construction with variable threshold parameters; verification of usefulness. - Anna Fogtman; Jacek Leluk; Bogdan Lesyng (Bio Algorithms Med Syst., 2006)

The mutational variability within homologous kinase families. - Jacek Kuska; Jacek Leluk; Bogdan Lesyng (Bio Algorithms Med Syst., 2006)

Nitano - Novel Inter/Intramolecular Colocation Calculator. - Jacek Kuska; Jacek Leluk; Bogdan Lesyng (Bio Algorithms Med Syst., 2010)

Keram: a novel stand-alone application for correlated mutations idenitification and analysis. - Jacek Kuska; Jacek Leluk; Bogdan Lesyng (Bio Algorithms Med Syst., 2010)

Talana: a novel application for protein variability/conservativity calculation. - Jacek Kuska; Jacek Leluk; Bogdan Lesyng (Bio Algorithms Med Syst., 2010)

Keram: a novel stand-alone application for correlated mutations identification and analysis. - Jacek Kuska; Jacek Leluk; Bogdan Lesyng (Bio Algorithms Med Syst., 2011)

A novel method to compare protein structures using local descriptors. - Pawel Daniluk; Bogdan Lesyng (BMC Bioinform., 2011)

ResiCon: a method for the identification of dynamic domains, hinges and interfacial regions in proteins. - Maciej Dziubinski; Pawel Daniluk; Bogdan Lesyng (Bioinform., 2016)

Toward the identification of molecular cogs. - Maciej Dziubinski; Bogdan Lesyng (J. Comput. Chem., 2016)

Implementation of a maximum clique search procedure on CUDA. - Pawel Daniluk; Grzegorz Firlik; Bogdan Lesyng (J. Heuristics, 2019)

DAMA: a method for computing multiple alignments of protein structures using local structure descriptors. - Pawel Daniluk; Tymoteusz Oleniecki; Bogdan Lesyng (Bioinform., 2021)