Imagining the unseen: stability-based cuboid arrangements for scene understanding. - Tianjia Shao; Áron Monszpart; Youyi Zheng; Bongjin Koo; Weiwei Xu; Kun Zhou 001; Niloy J. Mitra (ACM Trans. Graph., 2014)

Computational fabrication guided by function and material usage. - Bongjin Koo (2016)

Deformable Registration of a Preoperative 3D Liver Volume to a Laparoscopy Image Using Contour and Shading Cues. - Bongjin Koo; Erol Ozgur; Bertrand Le Roy; Emmanuel Buc; Adrien Bartoli (MICCAI (1), 2017)

Towards Zero-Waste Furniture Design. - Bongjin Koo; Jean Hergel; Sylvain Lefebvre 001; Niloy J. Mitra (IEEE Trans. Vis. Comput. Graph., 2017)

Preoperative liver registration for augmented monocular laparoscopy using backward-forward biomechanical simulation. - Erol Ozgur; Bongjin Koo; Bertrand Le Roy; Emmanuel Buc; Adrien Bartoli (Int. J. Comput. Assist. Radiol. Surg., 2018)

More Unlabelled Data or Label More Data? A Study on Semi-supervised Laparoscopic Image Segmentation. - Yunguan Fu; Maria R. Robu; Bongjin Koo; Crispin Schneider; Stijn van Laarhoven; Danail Stoyanov; Brian R. Davidson; Matthew J. Clarkson; Yipeng Hu (DART/MIL3ID@MICCAI, 2019)

Intraoperative Liver Surface Completion with Graph Convolutional VAE. - Simone Foti; Bongjin Koo; Thomas Dowrick; João Ramalhinho; Moustafa Allam; Brian R. Davidson; Danail Stoyanov; Matthew J. Clarkson (UNSURE/GRAIL@MICCAI, 2020)

SciKit-Surgery: compact libraries for surgical navigation. - Stephen A. Thompson; Thomas Dowrick; Mian Ahmad; Goufang Xiao; Bongjin Koo; Ester Bonmati; Kim Kahl; Matthew J. Clarkson (Int. J. Comput. Assist. Radiol. Surg., 2020)

3D Shape Variational Autoencoder Latent Disentanglement via Mini-Batch Feature Swapping for Bodies and Faces. - Simone Foti; Bongjin Koo; Danail Stoyanov; Matthew J. Clarkson (CVPR, 2022)

Towards Multi-modal Self-supervised Video and Ultrasound Pose Estimation for Laparoscopic Liver Surgery. - Nina Montaña Brown; João Ramalhinho; Bongjin Koo; Moustafa Allam; Brian R. Davidson; Kurinchi Gurusamy; Yipeng Hu; Matthew J. Clarkson (ASMUS@MICCAI, 2022)

Automatic, global registration in laparoscopic liver surgery. - Bongjin Koo; Maria R. Robu; Moustafa Allam; Micha Pfeiffer; Stephen A. Thompson; Kurinchi Gurusamy; Brian R. Davidson; Stefanie Speidel; David J. Hawkes; Danail Stoyanov; Matthew J. Clarkson (Int. J. Comput. Assist. Radiol. Surg., 2022)

Deep hashing for global registration of untracked 2D laparoscopic ultrasound to CT. - João Ramalhinho; Bongjin Koo; Nina Montaña Brown; Shaheer U. Saeed; Ester Bonmati; Kurinchi Gurusamy; Stephen P. Pereira; Brian R. Davidson; Yipeng Hu; Matthew J. Clarkson (Int. J. Comput. Assist. Radiol. Surg., 2022)

Heterogeneous reconstruction of deformable atomic models in Cryo-EM. - Youssef S. G. Nashed; Ariana Peck; Julien N. P. Martel; Axel Levy; Bongjin Koo; Gordon Wetzstein; Nina Miolane; Daniel Ratner; Frédéric Poitevin (CoRR, 2022)

Reconstructing Heterogeneous Cryo-EM Molecular Structures by Decomposing Them into Polymer Chains. - Bongjin Koo; Julien N. P. Martel; Ariana Peck; Axel Levy; Frédéric Poitevin; Nina Miolane (CoRR, 2023)

3D Generative Model Latent Disentanglement via Local Eigenprojection. - Simone Foti; Bongjin Koo; Danail Stoyanov; Matthew J. Clarkson (Comput. Graph. Forum, 2023)

The value of Augmented Reality in surgery - A usability study on laparoscopic liver surgery. - João Ramalhinho; Soojeong Yoo; Thomas Dowrick; Bongjin Koo; Murali Somasundaram; Kurinchi Gurusamy; David J. Hawkes; Brian R. Davidson; Ann Blandford; Matthew J. Clarkson (Medical Image Anal., 2023)

Latent disentanglement in mesh variational autoencoders improves the diagnosis of craniofacial syndromes and aids surgical planning. - Simone Foti; Alexander J. Rickart; Bongjin Koo; Eimear O' Sullivan; Lara S. van de Lande; Athanasios Papaioannou; Roman Khonsari; Danail Stoyanov; N. U. Owase Jeelani; Silvia Schievano; David J. Dunaway; Matthew J. Clarkson (Comput. Methods Programs Biomed., 2024)